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Arrate Muñoz Barrutia
Arrate Muñoz Barrutia
Professor, Univ. Carlos III de Madrid; Instituto de Investigación Sanitaria Gregorio Marañón
Verified email at ing.uc3m.es - Homepage
Title
Cited by
Cited by
Year
3D reconstruction of histological sections: Application to mammary gland tissue
I Arganda‐Carreras, R Fernández‐González, A Muñoz‐Barrutia, ...
Microscopy Research and Technique 73 (11), 1019-1029, 2010
6572010
Combination strategies in multi-atlas image segmentation: Application to brain MR data
X Artaechevarria, A Muñoz-Barrutia, C Ortiz-de-Solorzano
Medical Imaging, IEEE Transactions on 28 (8), 1266-1277, 2009
6522009
An objective comparison of cell-tracking algorithms
V Ulman, M Maška, KEG Magnusson, O Ronneberger, C Haubold, ...
Nature methods 14 (12), 1141-1152, 2017
5612017
A benchmark for comparison of cell tracking algorithms
M Maška, V Ulman, D Svoboda, P Matula, P Matula, C Ederra, A Urbiola, ...
Bioinformatics 30 (11), 1609-1617, 2014
4822014
Adiposoft: automated software for the analysis of white adipose tissue cellularity in histological sections
M Galarraga, J Campión, A Muñoz-Barrutia, N Boqué, H Moreno, ...
Journal of Lipid Research 53 (12), 2791-2796, 2012
3862012
DeepImageJ: A user-friendly environment to run deep learning models in ImageJ
E Gomez-de-Mariscal, C Garcia-Lopez-de-Haro, W Ouyang, L Donati, ...
Nature Methods 18, 1192-1195, 2021
1762021
Characterization of three-dimensional cancer cell migration in mixed collagen-Matrigel scaffolds using microfluidics and image analysis
M Anguiano, C Castilla, M Maška, C Ederra, R Peláez, X Morales, ...
PloS one 12 (2), e0171417, 2017
1742017
Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study
RD Rudyanto, S Kerkstra, EM van Rikxoort, C Fetita, PY Brillet, C Lefevre, ...
Medical image analysis 18 (7), 1217-1232, 2014
1732014
Automated neuromelanin imaging as a diagnostic biomarker for Parkinson's disease
G Castellanos, MA Fernández‐Seara, O Lorenzo‐Betancor, ...
Movement Disorders 30 (7), 945-952, 2015
1712015
Least-squares image resizing using finite differences
A Muñoz-Barrutia, T Blu, M Unser
IEEE Trans. Image Process 10 (9), 1365-1378, 2001
1602001
Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan-Vese Model
M Maska, O Danek, S Garasa, A Rouzaut, A Muñoz-Barrutia, OS Carlos
IEEE Transactions on Medical Imaging 32 (6), 995-1006, 2013
1362013
ANHIR: automatic non-rigid histological image registration challenge
J Borovec, J Kybic, I Arganda-Carreras, DV Sorokin, G Bueno, ...
IEEE transactions on medical imaging 39 (10), 3042-3052, 2020
1212020
Continuous wavelet transform with arbitrary scales and O (N) complexity
A Muñoz, R Ertlé, M Unser
Signal processing 82 (5), 749-757, 2002
1122002
Applications of Light Sheet Microscopy in Microdevices
I Albert-Smet, A Marcos-Vidal, JJ Vaquero, M Desco, A Muñoz-Barrutia, ...
Frontiers in Neuroanatomy 13, 1, 2019
802019
New Strategies for Echocardiographic Evaluation of Left Ventricular Function in a Mouse Model of Long-Term Myocardial Infarction
C Benavides-Vallve, D Corbacho, O Iglesias-Garcia, B Pelacho, E Albiasu, ...
PloS one 7 (7), e41691, 2012
672012
Quantification of lung damage in an elastase-induced mouse model of emphysema
A Muñoz-Barrutia, M Ceresa, X Artaechevarria, LM Montuenga, ...
Journal of Biomedical Imaging 2012, 5, 2012
662012
Segmentation of touching cell nuclei using a two-stage graph cut model
O Daněk, P Matula, C Ortiz-de-Solórzano, A Muñoz-Barrutia, M Maška, ...
Scandinavian Conference on Image Analysis, 410-419, 2009
642009
Benchmarking of Image Registration Methods for Differently Stained Histological Slides
J Borovec, A Munoz-Barrutia, J Kybic
2018 25th IEEE International Conference on Image Processing (ICIP), 3368-3372, 2018
582018
Use of the p-values as a size-dependent function to address practical differences when analyzing large datasets
E Gomez-de-Mariscal, V Guerrero, A Sneider, H Jayatilaka, JM Phillip, ...
Scientific Reports 11 (20942), 2021
552021
The Cell Tracking Challenge: 10 years of objective benchmarking
M Maška, V Ulman, P Delgado-Rodriguez, E Gómez-de-Mariscal, ...
Nature Methods, 2023
542023
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