|Recent Zika virus isolates induce premature differentiation of neural progenitors in human brain organoids|
E Gabriel, A Ramani, U Karow, M Gottardo, K Natarajan, LM Gooi, ...
Cell stem cell 20 (3), 397-406. e5, 2017
|PRC2 facilitates the regulatory topology required for poised enhancer function during pluripotent stem cell differentiation|
S Cruz-Molina, P Respuela, C Tebartz, P Kolovos, M Nikolic, R Fueyo, ...
Cell stem cell 20 (5), 689-705. e9, 2017
|HMGB2 loss upon senescence entry disrupts genomic organization and induces CTCF clustering across cell types|
A Zirkel, M Nikolic, K Sofiadis, JP Mallm, CA Brackley, H Gothe, ...
Molecular cell 70 (4), 730-744. e6, 2018
|QuickNGS elevates Next-Generation Sequencing data analysis to a new level of automation|
P Wagle, M Nikolić, P Frommolt
BMC genomics 16 (1), 1-8, 2015
|Imputation of orofacial clefting data identifies novel risk loci and sheds light on the genetic background of cleft lip±cleft palate and cleft palate only|
KU Ludwig, AC Böhmer, J Bowes, M Nikolić, N Ishorst, N Wyatt, ...
Human molecular genetics 26 (4), 829-842, 2017
|Foxd3 promotes exit from naive pluripotency through enhancer decommissioning and inhibits germline specification|
P Respuela, M Nikolić, M Tan, P Frommolt, Y Zhao, J Wysocka, ...
Cell stem cell 18 (1), 118-133, 2016
|Exploiting native forces to capture chromosome conformation in mammalian cell nuclei|
L Brant, T Georgomanolis, M Nikolic, CA Brackley, P Kolovos, ...
Molecular systems biology 12 (12), 891, 2016
|Modeling the pathological long-range regulatory effects of human structural variation with patient-specific hiPSCs|
M Laugsch, M Bartusel, R Rehimi, H Alirzayeva, A Karaolidou, ...
Cell Stem Cell 24 (5), 736-752. e12, 2019
|Binding of nuclear factor κB to noncanonical consensus sites reveals its multimodal role during the early inflammatory response|
P Kolovos, T Georgomanolis, A Koeferle, JD Larkin, L Brant, M Nikolicć, ...
Genome research 26 (11), 1478-1489, 2016
|Epigenomics-based identification of major cell identity regulators within heterogeneous cell populations|
R Rehimi, M Nikolic, S Cruz-Molina, C Tebartz, P Frommolt, E Mahabir, ...
Cell reports 17 (11), 3062-3076, 2016
|New targeted approaches for epigenetic age predictions|
Y Han, J Franzen, T Stiehl, M Gobs, CC Kuo, M Nikolić, J Hapala, ...
BMC biology 18 (1), 1-15, 2020
|An analysis of fft performance in prace application codes|
A Sunderland, S Pickles, M Nikolic, A Jovic, J Jakic, V Slavnic, I Girotto, ...
PRACE whitepaper, 2012
|Knoch, TA, van IJcken, WFJ, Cook, PR, Costa, IG, Grosveld, FG & Papantonis, A. Binding of nuclear kappa-B to non-canonical consensus sites reveals its multimodal role during …|
P Kolovos, T Georgomanolis, A Koeferle, JD Larkin, J Brant, M Nikolić, ...
Genome Research 26 (11), 1478-1489, 2016
|HMGB1 coordinates SASP-related chromatin folding and RNA homeostasis on the path to senescence|
K Sofiadis, M Nikolic, Y Kargapolova, N Josipovic, A Zirkel, A Papadakis, ...
bioRxiv, 540146, 2020
|Loss of TP53 mediates suppression of Macrophage Effector Function via Extracellular Vesicles and PDL1 towards Resistance against Chemoimmunotherapy in B-cell malignancies|
E Izquierdo, D Vorholt, B Sackey, J Nolte, SJ Blakemore, J Schmitz, ...
|GARLIC: a bioinformatic toolkit for aetiologically connecting diseases and cell type-specific regulatory maps|
M Nikolić, A Papantonis, A Rada-Iglesias
Human molecular genetics 26 (4), 742-752, 2017
|Active Akt signaling triggers CLL toward Richter transformation via overactivation of Notch1|
V Kohlhaas, SJ Blakemore, M Al-Maarri, N Nickel, M Pal, A Roth, ...
Blood, The Journal of the American Society of Hematology 137 (5), 646-660, 2021
|Targeted methods for epigenetic age predictions in mice|
Y Han, M Nikolić, M Gobs, J Franzen, G de Haan, H Geiger, W Wagner
Scientific Reports 10 (1), 1-10, 2020
|Disruption of the TFAP2A Regulatory Domain Causes Banchio-Oculo-Facial Syndrome (BOFS) and Illuminates Pathomechanisms for Other Human Neurocristopathies|
M Laugsch, M Bartusel, H Alirzayeva, A Karaolidou, R Rehimi, ...
|Epigenetic clocks are not accelerated in COVID-19 patients|
J Franzen, S Nüchtern, V Tharmapalan, M Vieri, M Nikolić, Y Han, ...