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Andrian Yang
Andrian Yang
Verified email at ebi.ac.uk
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Year
iSyTE 2.0: a database for expression-based gene discovery in the eye
A Kakrana, A Yang, D Anand, D Djordjevic, D Ramachandruni, A Singh, ...
Nucleic acids research 46 (D1), D875-D885, 2018
772018
A reference human induced pluripotent stem cell line for large-scale collaborative studies
CB Pantazis, A Yang, E Lara, JA McDonough, C Blauwendraat, L Peng, ...
Cell Stem Cell 29 (12), 1685-1702. e22, 2022
652022
Scalability and validation of big data bioinformatics software
A Yang, M Troup, JWK Ho
Computational and structural biotechnology journal 15, 379-386, 2017
622017
Light-focusing human micro-lenses generated from pluripotent stem cells model lens development and drug-induced cataract in vitro
P Murphy, MH Kabir, T Srivastava, ME Mason, CU Dewi, S Lim, A Yang, ...
Development 145 (1), dev155838, 2018
522018
Locus-specific expression of transposable elements in single cells with CELLO-seq
RV Berrens, A Yang, CE Laumer, ATL Lun, F Bieberich, CT Law, G Lan, ...
Nature biotechnology 40 (4), 546-554, 2022
442022
Falco: a quick and flexible single-cell RNA-seq processing framework on the cloud
A Yang, M Troup, P Lin, JWK Ho
Bioinformatics 33 (5), 767-769, 2017
252017
How difficult is inference of mammalian causal gene regulatory networks?
D Djordjevic, A Yang, A Zadoorian, K Rungrugeecharoen, JWK Ho
PLoS One 9 (11), e111661, 2014
252014
Integrative analysis identifies co-dependent gene expression regulation of BRG1 and CHD7 at distal regulatory sites in embryonic stem cells
P Yang, A Oldfield, T Kim, A Yang, JYH Yang, JWK Ho
Bioinformatics 33 (13), 1916-1920, 2017
232017
Enhanced cardiac repair by telomerase reverse transcriptase over-expression in human cardiac mesenchymal stromal cells
TYL Le, HA Pickett, A Yang, JWK Ho, S Thavapalachandran, S Igoor, ...
Scientific Reports 9 (1), 10579, 2019
172019
StarmapVis: An interactive and narrative visualisation tool for single-cell and spatial data
S Ma, X Fang, Y Yao, J Li, DC Morgan, Y Xia, CSM Kwok, MCK Lo, ...
Computational and Structural Biotechnology Journal 21, 1598-1605, 2023
13*2023
A cloud-based framework for applying metamorphic testing to a bioinformatics pipeline
M Troup, A Yang, AH Kamali, E Giannoulatou, TY Chen, JWK Ho
Proceedings of the 1st International Workshop on Metamorphic Testing, 33-36, 2016
132016
CHDgene: a curated database for congenital heart disease genes
A Yang, D Alankarage, H Cuny, EKK Ip, M Almog, J Lu, D Das, A Enriquez, ...
Circulation: Genomic and Precision Medicine 15 (3), e003539, 2022
112022
Genetic screening reveals phospholipid metabolism as a key regulator of the biosynthesis of the redox-active lipid coenzyme Q
A Ayer, DJ Fazakerley, C Suarna, GJ Maghzal, D Sheipouri, KJ Lee, ...
Redox biology 46, 102127, 2021
112021
Harnessing multiple source test cases in metamorphic testing: A case study in bioinformatics
JYS Tang, A Yang, TY Chen, JWK Ho
2017 IEEE/ACM 2nd International Workshop on Metamorphic Testing (MET), 10-13, 2017
72017
PBrowse: a web-based platform for real-time collaborative exploration of genomic data
PS Szot, A Yang, X Wang, C Parsania, U Röhm, KH Wong, JWK Ho
Nucleic acids research 45 (9), e67-e67, 2017
62017
Inter-gastruloid heterogeneity revealed by single cell transcriptomics time course: implications for organoid based perturbation studies
LU Rosen, LC Stapel, R Argelaguet, CG Barker, A Yang, W Reik, ...
bioRxiv, 2022.09. 27.509783, 2022
52022
Cloud accelerated alignment and assembly of full-length single-cell RNA-seq data using Falco
A Yang, A Kishore, B Phipps, JWK Ho
BMC genomics 20 (Suppl 10), 927, 2019
32019
Scavenger: A pipeline for recovery of unaligned reads utilising similarity with aligned reads
A Yang, JYS Tang, M Troup, JWK Ho
F1000Research 8, 2019
32019
Decoding the complex genetic causes of heart diseases using systems biology
D Djordjevic, V Deshpande, T Szczesnik, A Yang, DT Humphreys, ...
Biophysical reviews 7, 141-159, 2015
22015
Profiling human hypothalamic neurons reveals a candidate combination drug therapy for weight loss
HJC Chen, A Yang, S Mazzaferro, I Mali, O Cahn, K Kentistou, C Rowley, ...
bioRxiv, 2023.07. 18.549357, 2023
2023
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