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Joshua Wing Kei Ho
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Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
3612014
CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data
P Lin, M Troup, JWK Ho
Genome biology 18 (1), 1-11, 2017
3422017
Testing and validating machine learning classifiers by metamorphic testing
X Xie, JWK Ho, C Murphy, G Kaiser, B Xu, TY Chen
Journal of Systems and Software 84 (4), 544-558, 2011
3162011
Single-cell expression profiling reveals dynamic flux of cardiac stromal, vascular and immune cells in health and injury
N Farbehi, R Patrick, A Dorison, M Xaymardan, V Janbandhu, ...
Elife 8, e43882, 2019
2812019
ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis
JWK Ho, E Bishop, PV Karchenko, N Nègre, KP White, PJ Park
BMC genomics 12 (1), 1-12, 2011
1912011
Impact of sequencing depth in ChIP-seq experiments
YL Jung, LJ Luquette, JWK Ho, F Ferrari, M Tolstorukov, A Minoda, ...
Nucleic acids research 42 (9), e74-e74, 2014
1772014
An innovative approach for testing bioinformatics programs using metamorphic testing
TY Chen, JWK Ho, H Liu, X Xie
BMC bioinformatics 10 (1), 1-12, 2009
1752009
NAD deficiency, congenital malformations, and niacin supplementation
H Shi, A Enriquez, M Rapadas, EMMA Martin, R Wang, J Moreau, CK Lim, ...
New England Journal of Medicine 377 (6), 544-552, 2017
1682017
Differential variability analysis of gene expression and its application to human diseases
JWK Ho, M Stefani, CG Dos Remedios, MA Charleston
Bioinformatics 24 (13), i390-i398, 2008
1572008
Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci
SJ Zacharek, CM Fillmore, AN Lau, DW Gludish, A Chou, JWK Ho, ...
Cell stem cell 9 (3), 272-281, 2011
1382011
Heart failure–associated changes in RNA splicing of sarcomere genes
SW Kong, YW Hu, JWK Ho, S Ikeda, S Polster, R John, JL Hall, E Bisping, ...
Circulation: Cardiovascular Genetics 3 (2), 138-146, 2010
1382010
Male-lineage transmission of an acquired metabolic phenotype induced by grand-paternal obesity
JE Cropley, SA Eaton, A Aiken, PE Young, E Giannoulatou, JWK Ho, ...
Molecular metabolism 5 (8), 699-708, 2016
1302016
Application of metamorphic testing to supervised classifiers
X Xie, J Ho, C Murphy, G Kaiser, B Xu, TY Chen
2009 Ninth International Conference on Quality Software, 135-144, 2009
1122009
A Wnt-bmp feedback circuit controls intertissue signaling dynamics in tooth organogenesis
DJ O’Connell, JWK Ho, T Mammoto, A Turbe-Doan, JT O’Connell, ...
Science signaling 5 (206), ra4-ra4, 2012
1032012
Targeted next-generation sequencing identifies pathogenic variants in familial congenital heart disease
GM Blue, EP Kirk, E Giannoulatou, SL Dunwoodie, JWK Ho, DCK Hilton, ...
Journal of the American College of Cardiology 64 (23), 2498-2506, 2014
932014
iSyTE: integrated Systems Tool for Eye gene discovery
SA Lachke, JWK Ho, GV Kryukov, DJ O'Connell, A Aboukhalil, ML Bulyk, ...
Investigative ophthalmology & visual science 53 (3), 1617-1627, 2012
922012
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity
B Zhang, DS Day, JW Ho, L Song, J Cao, D Christodoulou, JG Seidman, ...
Genome research 23 (6), 917-927, 2013
872013
Verification and validation of bioinformatics software without a gold standard: a case study of BWA and Bowtie
E Giannoulatou, SH Park, DT Humphreys, JWK Ho
BMC bioinformatics 15 (16), 1-8, 2014
692014
Impact of sequencing depth and read length on single cell RNA sequencing data of T cells
S Rizzetto, AA Eltahla, P Lin, R Bull, AR Lloyd, JWK Ho, V Venturi, ...
Scientific reports 7 (1), 1-11, 2017
682017
SeqVis: visualization of compositional heterogeneity in large alignments of nucleotides
JWK Ho, CE Adams, JB Lew, TJ Matthews, CC Ng, A Shahabi-Sirjani, ...
Bioinformatics 22 (17), 2162-2163, 2006
642006
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Articles 1–20