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Uday S. Evani
Uday S. Evani
Senior Data Scientist at New York Genome Center
Verified email at nygenome.org
Title
Cited by
Cited by
Year
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
82472012
Genome-wide analyses identify KIF5A as a novel ALS gene
A Nicolas, KP Kenna, AE Renton, N Ticozzi, F Faghri, R Chia, ...
Neuron 97 (6), 1268-1283. e6, 2018
5782018
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 3934, 2014
4352014
Haplotype-resolved diverse human genomes and integrated analysis of structural variation
P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ...
Science 372 (6537), eabf7117, 2021
4342021
High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios
M Byrska-Bishop, US Evani, X Zhao, AO Basile, HJ Abel, AA Regier, ...
Cell 185 (18), 3426-3440. e19, 2022
4252022
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 1235587, 2013
4232013
An integrative variant analysis suite for whole exome next-generation sequencing data
D Challis, J Yu, US Evani, AR Jackson, S Paithankar, C Coarfa, ...
BMC bioinformatics 13, 1-12, 2012
3142012
Proteomic analysis of age‐dependent changes in protein solubility identifies genes that modulate lifespan
P Reis‐Rodrigues, G Czerwieniec, TW Peters, US Evani, S Alavez, ...
Aging cell 11 (1), 120-127, 2012
1852012
Curated variation benchmarks for challenging medically relevant autosomal genes
J Wagner, ND Olson, L Harris, J McDaniel, H Cheng, A Fungtammasan, ...
Nature biotechnology 40 (5), 672-680, 2022
1232022
Benchmarking challenging small variants with linked and long reads
J Wagner, ND Olson, L Harris, Z Khan, J Farek, M Mahmoud, A Stankovic, ...
Cell Genomics 2 (5), 2022
1152022
Recent ultra-rare inherited variants implicate new autism candidate risk genes
AB Wilfert, TN Turner, SC Murali, PH Hsieh, A Sulovari, T Wang, BP Coe, ...
Nature genetics 53 (8), 1125-1134, 2021
912021
Bioinformatic tools for identifying disease gene and SNP candidates
SD Mooney, VG Krishnan, US Evani
Genetic Variation: Methods and Protocols, 307-319, 2010
752010
In silico functional profiling of human disease‐associated and polymorphic amino acid substitutions
M Mort, US Evani, VG Krishnan, KK Kamati, PH Baenziger, A Bagchi, ...
Human Mutation 31 (3), 335-346, 2010
622010
Atlas2 Cloud: a framework for personal genome analysis in the cloud
US Evani, D Challis, J Yu, AR Jackson, S Paithankar, MN Bainbridge, ...
BMC genomics 13, 1-9, 2012
492012
Integrative transcriptomic analysis of the amyotrophic lateral sclerosis spinal cord implicates glial activation and suggests new risk genes
J Humphrey, S Venkatesh, R Hasan, JT Herb, K de Paiva Lopes, ...
Nature Neuroscience 26 (1), 150-162, 2023
422023
Tor1 regulates protein solubility in Saccharomyces cerevisiae
TW Peters, MJ Rardin, G Czerwieniec, US Evani, P Reis-Rodrigues, ...
Molecular biology of the cell 23 (24), 4679-4688, 2012
332012
STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation
T Wittkop, E TerAvest, US Evani, KM Fleisch, AE Berman, C Powell, ...
BMC bioinformatics 14, 1-10, 2013
252013
Haplotype-resolved diverse human genomes and integrated analysis of structural variation. Science 372, eabf7117
P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ...
232021
An ontology-neutral framework for enrichment analysis
R Tirrell, U Evani, AE Berman, SD Mooney, MA Musen, NH Shah
AMIA Annual Symposium Proceedings 2010, 797, 2010
232010
Massively parallel processing of whole genome sequence data: an in-depth performance study
A Roy, Y Diao, U Evani, A Abhyankar, C Howarth, R Le Priol, T Bloom
Proceedings of the 2017 ACM International Conference on Management of Data …, 2017
152017
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