The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups C Curtis, SP Shah, SF Chin, G Turashvili, OM Rueda, MJ Dunning, ... Nature 486 (7403), 346-352, 2012 | 6207 | 2012 |
The Pfam protein families database RD Finn, J Tate, J Mistry, PC Coggill, SJ Sammut, HR Hotz, G Ceric, ... Nucleic acids research 36 (suppl_1), D281-D288, 2007 | 2884 | 2007 |
The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes B Pereira, SF Chin, OM Rueda, HKM Vollan, E Provenzano, HA Bardwell, ... Nature communications 7 (1), 1-16, 2016 | 1664 | 2016 |
A biobank of breast cancer explants with preserved intra-tumor heterogeneity to screen anticancer compounds A Bruna, OM Rueda, W Greenwood, AS Batra, M Callari, RN Batra, ... Cell 167 (1), 260-274. e22, 2016 | 467 | 2016 |
Multi-omic machine learning predictor of breast cancer therapy response SJ Sammut, M Crispin-Ortuzar, SF Chin, E Provenzano, HA Bardwell, ... Nature 601 (7894), 623-629, 2022 | 337 | 2022 |
Transcriptional diversity during lineage commitment of human blood progenitors L Chen, M Kostadima, JHA Martens, G Canu, SP Garcia, E Turro, ... Science 345 (6204), 1251033, 2014 | 329 | 2014 |
Dynamics of breast-cancer relapse reveal late-recurring ER-positive genomic subgroups OM Rueda, SJ Sammut, JA Seoane, SF Chin, JL Caswell-Jin, M Callari, ... Nature 567 (7748), 399-404, 2019 | 327 | 2019 |
Residual cancer burden after neoadjuvant chemotherapy and long-term survival outcomes in breast cancer: a multicentre pooled analysis of 5161 patients C Yau, M Osdoit, M van der Noordaa, S Shad, J Wei, D de Croze, ... The Lancet Oncology 23 (1), 149-160, 2022 | 269 | 2022 |
Personalized circulating tumor DNA analysis to detect residual disease after neoadjuvant therapy in breast cancer BR McDonald, T Contente-Cuomo, SJ Sammut, A Odenheimer-Bergman, ... Science translational medicine 11 (504), eaax7392, 2019 | 254 | 2019 |
Integration of genomic, transcriptomic and proteomic data identifies two biologically distinct subtypes of invasive lobular breast cancer M Michaut, SF Chin, I Majewski, TM Severson, T Bismeijer, L De Koning, ... Scientific reports 6 (1), 1-13, 2016 | 203 | 2016 |
Pfam 10 years on: 10 000 families and still growing SJ Sammut, RD Finn, A Bateman Briefings in bioinformatics 9 (3), 210-219, 2008 | 160 | 2008 |
The genomic and immune landscapes of lethal metastatic breast cancer L De Mattos-Arruda, SJ Sammut, EM Ross, R Bashford-Rogers, ... Cell reports 27 (9), 2690-2708. e10, 2019 | 116 | 2019 |
New model for estimating glomerular filtration rate in patients with cancer T Janowitz, EH Williams, A Marshall, N Ainsworth, PB Thomas, ... Journal of Clinical Oncology 35 (24), 2798-2805, 2017 | 103 | 2017 |
The molecular landscape of Asian breast cancers reveals clinically relevant population-specific differences JW Pan, MMA Zabidi, PS Ng, MY Meng, SN Hasan, B Sandey, ... Nature communications 11 (1), 6433, 2020 | 62 | 2020 |
Computational approach to discriminate human and mouse sequences in patient-derived tumour xenografts M Callari, AS Batra, RN Batra, SJ Sammut, W Greenwood, H Clifford, ... BMC genomics 19, 1-12, 2018 | 60 | 2018 |
Intersect-then-combine approach: improving the performance of somatic variant calling in whole exome sequencing data using multiple aligners and callers M Callari, SJ Sammut, L De Mattos-Arruda, A Bruna, OM Rueda, SF Chin, ... Genome medicine 9, 1-11, 2017 | 58 | 2017 |
DNA methylation landscapes of 1538 breast cancers reveal a replication-linked clock, epigenomic instability and cis-regulation RN Batra, A Lifshitz, AT Vidakovic, SF Chin, A Sati-Batra, SJ Sammut, ... Nature communications 12 (1), 5406, 2021 | 53 | 2021 |
A tumor DNA complex aberration index is an independent predictor of survival in breast and ovarian cancer HKM Vollan, OM Rueda, SF Chin, C Curtis, G Turashvili, S Shah, ... Molecular oncology 9 (1), 115-127, 2015 | 52 | 2015 |
AACR Project GENIE: 100,000 cases and beyond TJ Pugh, JL Bell, JP Bruce, GJ Doherty, M Galvin, MF Green, ... Cancer Discovery 12 (9), 2044-2057, 2022 | 51 | 2022 |
Abstract P4-01-21: Multiplexed targeted digital sequencing of circulating tumor DNA to detect minimal residual disease in early and locally advanced breast cancer BR McDonald, T Contente-Cuomo, SJ Sammut, B Ernst, ... Cancer Research 79 (4_Supplement), P4-01-21-P4-01-21, 2019 | 50 | 2019 |