Accelerating climate resilient plant breeding by applying next-generation artificial intelligence AL Harfouche, DA Jacobson, D Kainer, JC Romero, AH Harfouche, ... Trends in biotechnology 37 (11), 1217-1235, 2019 | 193 | 2019 |
Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models MR Garvin, E T. Prates, M Pavicic, P Jones, BK Amos, A Geiger, MB Shah, ... Genome biology 21, 1-26, 2020 | 63 | 2020 |
Can exascale computing and explainable artificial intelligence applied to plant biology deliver on the United Nations sustainable development goals? J Streich, J Romero, JGFM Gazolla, D Kainer, A Cliff, ET Prates, JB Brown, ... Current opinion in biotechnology 61, 217-225, 2020 | 50 | 2020 |
Synthesis and characterization of Fe-Ti-Sb intermetallic compounds: Discovery of a new Slater-Pauling phase N Naghibolashrafi, S Keshavarz, VI Hegde, A Gupta, WH Butler, ... Physical Review B 93 (10), 104424, 2016 | 38 | 2016 |
A high-performance computing implementation of iterative random forest for the creation of predictive expression networks A Cliff, J Romero, D Kainer, A Walker, A Furches, D Jacobson Genes 10 (12), 996, 2019 | 36 | 2019 |
NF-κB perturbation reveals unique immunomodulatory functions in Prx1+ fibroblasts that promote development of atopic dermatitis KI Ko, JJ Merlet, BP DerGarabedian, H Zhen, Y Suzuki-Horiuchi, ... Science translational medicine 14 (630), eabj0324, 2022 | 27 | 2022 |
Neurotransmitter networks in mouse prefrontal cortex are reconfigured by isoflurane anesthesia X Zhang, AG Baer, JM Price, PC Jones, BJ Garcia, J Romero, AM Cliff, ... Journal of neurophysiology 123 (6), 2285-2296, 2020 | 26 | 2020 |
Anisotropy in layered half-metallic Heusler alloy superlattices JG Azadani, K Munira, J Romero, J Ma, C Sivakumar, AW Ghosh, ... Journal of Applied Physics 119 (4), 2016 | 25 | 2016 |
Polypharmacy-associated risk of hospitalisation among people ageing with and without HIV: an observational study AC Justice, KS Gordon, J Romero, EJ Edelman, BJ Garcia, P Jones, ... The Lancet Healthy Longevity 2 (10), e639-e650, 2021 | 23 | 2021 |
Achieving perpendicular anisotropy in half-metallic Heusler alloys for spin device applications K Munira, J Romero, WH Butler Journal of Applied Physics 115 (17), 2014 | 20 | 2014 |
Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ... Frontiers in Plant Science 10, 1249, 2019 | 16 | 2019 |
Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data AM Walker, A Cliff, J Romero, MB Shah, P Jones, JGFM Gazolla, ... Computational and Structural Biotechnology Journal 20, 3372-3386, 2022 | 15 | 2022 |
Rapid expansion of SARS-CoV-2 variants of concern is a result of adaptive epistasis MR Garvin, ET Prates, J Romero, A Cliff, MG JGF, M Pickholz, M Pavicic, ... | 9* | 2021 |
Clinical and radiographic response following targeting of BCAN-NTRK1 fusion in glioneuronal tumor. NPJ Precis Oncol 1: 5 C Alvarez-Breckenridge, JJ Miller, N Nayyar, CM Gill, A Kaneb, ... | 6 | 2017 |
Using iterative random forest to find geospatial environmental and Sociodemographic predictors of suicide attempts M Pavicic, AM Walker, KA Sullivan, J Lagergren, A Cliff, J Romero, ... Frontiers in psychiatry 14, 1178633, 2023 | 2* | 2023 |
Digging deeper into GWAS signal using GRIN implicates additional genes contributing to suicidal behavior KA Sullivan, M Lane, M Cashman, JI Miller, M Pavicic, AM Walker, A Cliff, ... medRxiv, 2022.04. 20.22273895, 2022 | 2 | 2022 |
Quantum biological insights into CRISPR-Cas9 sgRNA efficiency from explainable-AI driven feature engineering JM Noshay, T Walker, WG Alexander, DM Klingeman, J Romero, ... Nucleic Acids Research 51 (19), 10147-10161, 2023 | 1 | 2023 |
Better Understanding Genomic Architecture with the use of Applied Statistics and Explainable Artificial Intelligence JC Romero | 1 | 2022 |
Clustering the Planet: An Exascale Approach to Determining Global Climatype Zones J Streich, A Furches, D Kainer, BJ Garcia, P Jones, J Romero, MR Garvin, ... bioRxiv, 2023.06. 27.546742, 2023 | | 2023 |
Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach ET Prates, MR Garvin, P Jones, JI Miller, KA Sullivan, A Cliff, ... SARS-CoV-2: Methods and Protocols, 317-351, 2022 | | 2022 |