Michael A Beer
Michael A Beer
Dept. of Biomedical Engineering and McKusick-Nathans Dept. of Genetic Medicine, Johns Hopkins
Verified email at jhu.edu - Homepage
Title
Cited by
Cited by
Year
Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis
TC Chang, EA Wentzel, OA Kent, K Ramachandran, M Mullendore, ...
Molecular cell 26 (5), 745-752, 2007
22082007
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
14142014
Comparisons and physics basis of tokamak transport models and turbulence simulations
AM Dimits, G Bateman, MA Beer, BI Cohen, W Dorland, GW Hammett, ...
Physics of Plasmas 7 (3), 969-983, 2000
10722000
Predicting gene expression from sequence
MA Beer, S Tavazoie
Cell 117 (2), 185-198, 2004
7212004
Comparison of the transcriptional landscapes between human and mouse tissues
S Lin, Y Lin, JR Nery, MA Urich, A Breschi, CA Davis, A Dobin, C Zaleski, ...
Proceedings of the National Academy of Sciences 111 (48), 17224-17229, 2014
5142014
Quantitative predictions of tokamak energy confinement from first‐principles simulations with kinetic effects
M Kotschenreuther, W Dorland, MA Beer, GW Hammett
Physics of Plasmas 2 (6), 2381-2389, 1995
4411995
Lin-28B transactivation is necessary for Myc-mediated let-7 repression and proliferation
TC Chang, LR Zeitels, HW Hwang, RR Chivukula, EA Wentzel, M Dews, ...
Proceedings of the National Academy of Sciences 106 (9), 3384-3389, 2009
4352009
Field‐aligned coordinates for nonlinear simulations of tokamak turbulence
MA Beer, SC Cowley, GW Hammett
Physics of Plasmas 2 (7), 2687-2700, 1995
3841995
Enhanced regulatory sequence prediction using gapped k-mer features
M Ghandi, D Lee, M Mohammad-Noori, MA Beer
PLoS Comput Biol 10 (7), e1003711, 2014
3302014
A method to predict the impact of regulatory variants from DNA sequence
D Lee, DU Gorkin, M Baker, BJ Strober, AL Asoni, AS McCallion, MA Beer
Nature genetics 47 (8), 955, 2015
3272015
Developments in the gyrofluid approach to tokamak turbulence simulations
GW Hammett, MA Beer, W Dorland, SC Cowley, SA Smith
Plasma physics and controlled fusion 35 (8), 973, 1993
3071993
Shearing rate of time-dependent EŚ B flow
TS Hahm, MA Beer, Z Lin, GW Hammett, WW Lee, WM Tang
Physics of Plasmas 6 (3), 922-926, 1999
3011999
A common allele in RPGRIP1L is a modifier of retinal degeneration in ciliopathies
H Khanna, EE Davis, CA Murga-Zamalloa, A Estrada-Cuzcano, I Lopez, ...
Nature genetics 41 (6), 739-745, 2009
2742009
Turbulent fluctuations in TFTR configurations with reversed magnetic shear
E Mazzucato, SH Batha, M Beer, M Bell, RE Bell, RV Budny, C Bush, ...
Physical review letters 77 (15), 3145, 1996
2371996
Toroidal gyrofluid equations for simulations of tokamak turbulence
MA Beer, GW Hammett
Physics of Plasmas 3 (11), 4046-4064, 1996
2291996
Discriminative prediction of mammalian enhancers from DNA sequence
D Lee, R Karchin, MA Beer
Genome research 21 (12), 2167-2180, 2011
2152011
Gyrofluid simulations of turbulence suppression in reversed-shear experiments on the Tokamak Fusion Test Reactor
MA Beer, GW Hammett, G Rewoldt, EJ Synakowski, MC Zarnstorff, ...
Physics of Plasmas 4 (5), 1792-1799, 1997
1741997
Roles of electric field shear and shafranov shift in sustaining high confinement in enhanced reversed shear plasmas on the TFTR tokamak
EJ Synakowski, SH Batha, MA Beer, MG Bell, RE Bell, RV Budny, ...
Physical review letters 78 (15), 2972, 1997
1441997
Local transport barrier formation and relaxation in reverse-shear plasmas on the tokamak fusion test reactor
EJ Synakowski, SH Batha, MA Beer, MG Bell, RE Bell, RV Budny, ...
Physics of Plasmas 4 (5), 1736-1744, 1997
1411997
Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b
DM McGaughey, RM Vinton, J Huynh, A Al-Saif, MA Beer, AS McCallion
Genome research 18 (2), 252-260, 2008
1372008
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