| STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ... Nucleic acids research 47 (D1), D607-D613, 2019 | 13895 | 2019 |
| STRING v10: protein–protein interaction networks, integrated over the tree of life D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ... Nucleic acids research 43 (D1), D447-D452, 2015 | 9989 | 2015 |
| STRING v10: protein–protein interaction networks, integrated over the tree of life D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ... Nucleic acids research 43 (D1), D447-D452, 2015 | 9989 | 2015 |
| The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible D Szklarczyk, JH Morris, H Cook, M Kuhn, S Wyder, M Simonovic, ... Nucleic acids research 45 (D1), D362-D368, 2017 | 6803 | 2017 |
| The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets D Szklarczyk, AL Gable, KC Nastou, D Lyon, R Kirsch, S Pyysalo, ... Nucleic Acids Research 49 (D1), D605-D612, 2021 | 5014 | 2021 |
| STRING v9. 1: protein-protein interaction networks, with increased coverage and integration A Franceschini, D Szklarczyk, S Frankild, M Kuhn, M Simonovic, A Roth, ... Nucleic Acids Research 41 (D1), D808-D815, 2013 | 4733 | 2013 |
| The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored D Szklarczyk, A Franceschini, M Kuhn, M Simonovic, A Roth, P Minguez, ... Nucleic acids research 39 (suppl 1), D561, 2011 | 3836 | 2011 |
| Comparative assessment of large-scale data sets of protein–protein interactions C Von Mering, R Krause, B Snel, M Cornell, SG Oliver, S Fields, P Bork Nature 417 (6887), 399-403, 2002 | 3003 | 2002 |
| Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution LDW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, ... Nature 432 (7018), 695-716, 2004 | 2906 | 2004 |
| STRING 8—a global view on proteins and their functional interactions in 630 organisms LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ... Nucleic acids research 37 (suppl 1), D412-D416, 2009 | 2877 | 2009 |
| eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses J Huerta-Cepas, D Szklarczyk, D Heller, A Hernández-Plaza, SK Forslund, ... Nucleic acids research 47 (D1), D309-D314, 2019 | 2684 | 2019 |
| STRING: a database of predicted functional associations between proteins C Mering, M Huynen, D Jaeggi, S Schmidt, P Bork, B Snel Nucleic acids research 31 (1), 258-261, 2003 | 2380 | 2003 |
| Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ... Molecular biology and evolution 34 (8), 2115-2122, 2017 | 2149 | 2017 |
| Comparative metagenomics of microbial communities SG Tringe, C Von Mering, A Kobayashi, AA Salamov, K Chen, HW Chang, ... Science 308 (5721), 554-557, 2005 | 2013 | 2005 |
| eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ... Nucleic acids research 44 (D1), D286-D293, 2016 | 1904 | 2016 |
| STRING: known and predicted protein–protein associations, integrated and transferred across organisms C Von Mering, LJ Jensen, B Snel, SD Hooper, M Krupp, M Foglierini, ... Nucleic acids research 33 (suppl_1), D433-D437, 2005 | 1902 | 2005 |
| Toward automatic reconstruction of a highly resolved tree of life FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork Science 311 (5765), 1283, 2006 | 1790 | 2006 |
| Toward automatic reconstruction of a highly resolved tree of life FD Ciccarelli, T Doerks, C von Mering, CJ Creevey, B Snel, P Bork Science 311 (5765), 1283-1287, 2006 | 1790 | 2006 |
| STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data D Szklarczyk, A Santos, C von Mering, LJ Jensen, P Bork, M Kuhn Nucleic acids research 44 (D1), D380-D384, 2016 | 1269 | 2016 |
| Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota B Stecher, R Robbiani, AW Walker, AM Westendorf, M Barthel, M Kremer, ... PLoS biology 5 (10), e244, 2007 | 1161 | 2007 |
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