Andre Lamurias
Andre Lamurias
NOVA LINCS, NOVA School of Science and Technology
Verified email at - Homepage
Cited by
Cited by
The CHEMDNER corpus of chemicals and drugs and its annotation principles
M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ...
Journal of cheminformatics 7, 1-17, 2015
BO-LSTM: classifying relations via long short-term memory networks along biomedical ontologies
A Lamurias, D Sousa, LA Clarke, FM Couto
BMC bioinformatics 20, 1-12, 2019
Text Mining for Bioinformatics Using Biomedical Literature
A Lamurias, FM Couto
Extracting microRNA-gene relations from biomedical literature using distant supervision
A Lamurias, LA Clarke, FM Couto
PloS one 12 (3), e0171929, 2017
A silver standard corpus of human phenotype-gene relations
D Sousa, A Lamúrias, FM Couto
arXiv preprint arXiv:1903.10728, 2019
MER: a shell script and annotation server for minimal named entity recognition and linking
FM Couto, A Lamurias
Journal of cheminformatics 10, 1-10, 2018
Identifying human phenotype terms by combining machine learning and validation rules
M Lobo, A Lamurias, FM Couto
BioMed Research International 2017, 2017
Semantic Similarity Definition
FM Couto, A Lamurias
Improving chemical entity recognition through h-index based semantic similarity
A Lamurias, JD Ferreira, FM Couto
Journal of cheminformatics 7, 1-9, 2015
Chemical compound and drug name recognition using CRFs and semantic similarity based on ChEBI
A Lamurias, T Grego, FM Couto
BioCreative Challenge Evaluation Workshop 2, 75, 2013
Metagenomic binning with assembly graph embeddings
A Lamurias, M Sereika, M Albertsen, K Hose, TD Nielsen
Bioinformatics 38 (19), 4481–4487, 2022
Lasigebiotm at MEDIQA 2019: biomedical question answering using bidirectional transformers and named entity recognition
A Lamurias, FM Couto
Proceedings of the 18th BioNLP workshop and shared task, 523-527, 2019
PPR-SSM: personalized PageRank and semantic similarity measures for entity linking
A Lamurias, P Ruas, FM Couto
BMC bioinformatics 20, 1-12, 2019
MER: a minimal named-entity recognition tagger and annotation server
FM Couto, LF Campos, A Lamurias
Proceedings of the BioCreative 5, 130-137, 2017
Linking chemical and disease entities to ontologies by integrating PageRank with extracted relations from literature
P Ruas, A Lamurias, FM Couto
Journal of Cheminformatics 12, 1-11, 2020
Using neural networks for relation extraction from biomedical literature
D Sousa, A Lamurias, FM Couto
Artificial Neural Networks, 289-305, 2021
Generating a Tolerogenic Cell Therapy Knowledge Graph from Literature
A Lamurias, JD Ferreira, LA Clarke, FM Couto
Frontiers in immunology 8, 1656, 2017
An extended overview of the CLEF 2020 ChEMU lab: information extraction of chemical reactions from patents
J He, DQ Nguyen, SA Akhondi, C Druckenbrodt, C Thorne, R Hoessel, ...
Proceedings of the CLEF 2020 conference, 2020
Generating biomedical question answering corpora from Q&A forums
A Lamurias, D Sousa, FM Couto
IEEE Access 8, 161042-161051, 2020
ULISBOA at SemEval-2016 Task 12: Extraction of temporal expressions, clinical events and relations using IBEnt
M Barros, A Lamurias, G Figueiro, M Antunes, J Teixeira, A Pinheiro, ...
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