| Substitutions in dynamics, arithmetics and combinatorics P Arnoux, V Berthé, S Ferenci, S Ito, C Mauduit, M Mori, J Peyriere, ... Lecture Notes in Mathematics 1794, 2002 | 1077* | 2002 |
| Tilings associated with beta-numeration and substitutions V Berthé, A Siegel Integers 5 (3), A2, 2005 | 138 | 2005 |
| Geometric representation of substitutions of Pisot type V Canterini, A Siegel Transactions of the American Mathematical Society 353 (12), 5121-5144, 2001 | 138 | 2001 |
| Traceability, reproducibility and wiki-exploration for “à-la-carte” reconstructions of genome-scale metabolic models M Aite, M Chevallier, C Frioux, C Trottier, J Got, MP Cortés, SN Mendoza, ... PLoS computational biology 14 (5), e1006146, 2018 | 123 | 2018 |
| Repair and prediction (under inconsistency) in large biological networks with answer set programming M Gebser, C Guziolowski, M Ivanchev, T Schaub, A Siegel, S Thiele, ... Twelfth International Conference on the Principles of Knowledge …, 2010 | 105 | 2010 |
| Meneco, a topology-based gap-filling tool applicable to degraded genome-wide metabolic networks S Prigent, C Frioux, SM Dittami, S Thiele, A Larhlimi, G Collet, F Gutknecht, ... PLoS computational biology 13 (1), e1005276, 2017 | 103 | 2017 |
| Exhaustively characterizing feasible logic models of a signaling network using answer set programming C Guziolowski, S Videla, F Eduati, S Thiele, T Cokelaer, A Siegel, ... Bioinformatics 29 (18), 2320-2326, 2013 | 94 | 2013 |
| A transcriptome multi-tissue analysis identifies biological pathways and genes associated with variations in feed efficiency of growing pigs F Gondret, A Vincent, M Houée-Bigot, A Siegel, S Lagarrigue, D Causeur, ... BMC genomics 18, 1-17, 2017 | 88 | 2017 |
| Automate des préfixes-suffixes associés à une substitution primitive V Canterini, A Siegel J. Th eor. Nombres Bordeaux 13 (2), 353-369, 2001 | 85 | 2001 |
| Topological properties of Rauzy fractals A Siegel, JM Thuswaldner Mémoires de la SMF 118, 2009 | 82 | 2009 |
| On the Pisot substitution conjecture S Akiyama, M Barge, V Berthé, JY Lee, A Siegel Mathematics of aperiodic order, 33-72, 2015 | 79 | 2015 |
| Metage2Metabo, microbiota-scale metabolic complementarity for the identification of key species A Belcour, C Frioux, M Aite, A Bretaudeau, F Hildebrand, A Siegel Elife 9, e61968, 2020 | 78 | 2020 |
| MiR-202 controls female fecundity by regulating medaka oogenesis S Gay, J Bugeon, A Bouchareb, L Henry, C Delahaye, F Legeai, ... PLoS genetics 14 (9), e1007593, 2018 | 77 | 2018 |
| Boolean network identification from perturbation time series data combining dynamics abstraction and logic programming M Ostrowski, L Paulevé, T Schaub, A Siegel, C Guziolowski Biosystems 149, 139-153, 2016 | 60 | 2016 |
| Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks A Siegel, O Radulescu, M Le Borgne, P Veber, J Ouy, S Lagarrigue Biosystems 84 (2), 153-174, 2006 | 58 | 2006 |
| Two-dimensional iterated morphisms and discrete planes P Arnoux, V Berthé, A Siegel Theoretical Computer Science 319 (1-3), 145-176, 2004 | 54 | 2004 |
| Cyanorak v2. 1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes L Garczarek, U Guyet, H Doré, GK Farrant, M Hoebeke, L Brillet-Guéguen, ... Nucleic acids research 49 (D1), D667-D676, 2021 | 53 | 2021 |
| Représentation des systemes dynamiques substitutifs non unimodulaires A Siegel Ergodic Theory and Dynamical Systems 23 (4), 1247-1273, 2003 | 52 | 2003 |
| Purely periodic β-expansions in the Pisot non-unit case V Berthé, A Siegel Journal of Number Theory 127 (2), 153-172, 2007 | 51 | 2007 |
| The genome‐scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond S Prigent, G Collet, SM Dittami, L Delage, F Ethis de Corny, O Dameron, ... The Plant Journal 80 (2), 367-381, 2014 | 49 | 2014 |
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