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Yingdong Zhao
Yingdong Zhao
National Cancer Institute
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Analysis of gene expression data using BRB-array tools
R Simon, A Lam, MC Li, M Ngan, S Menenzes, Y Zhao
Cancer informatics 3, 117693510700300022, 2007
8252007
Design and analysis of DNA microarray investigations
RM Simon, EL Korn, LM McShane, MD Radmacher, GW Wright, Y Zhao
Springer, 2003
5172003
Atomic structure of PDE4: insights into phosphodiesterase mechanism and specificity
RX Xu, AM Hassell, D Vanderwall, MH Lambert, WD Holmes, MA Luther, ...
Science 288 (5472), 1822-1825, 2000
4362000
MicroRNA expression differentiates histology and predicts survival of lung cancer
MT Landi, Y Zhao, M Rotunno, J Koshiol, H Liu, AW Bergen, M Rubagotti, ...
Clinical Cancer Research 16 (2), 430-441, 2010
4282010
Crystal structure of calcineurin–cyclophilin–cyclosporin shows common but distinct recognition of immunophilin–drug complexes
Q Huai, HY Kim, Y Liu, Y Zhao, A Mondragon, JO Liu, H Ke
Proceedings of the National Academy of Sciences 99 (19), 12037-12042, 2002
3712002
Prospective molecular profiling of melanoma metastases suggests classifiers of immune responsiveness
E Wang, LD Miller, GA Ohnmacht, S Mocellin, A Perez-Diez, D Petersen, ...
Cancer research 62 (13), 3581-3586, 2002
3172002
Identification of candidate T-cell epitopes and molecular mimics in chronic Lyme disease
B Hemmer, B Gran, Y Zhao, A Marques, J Pascal, A Tzou, T Kondo, ...
Nature medicine 5 (12), 1375-1382, 1999
2891999
Novel technologies and emerging biomarkers for personalized cancer immunotherapy
J Yuan, PS Hegde, R Clynes, PG Foukas, A Harari, TO Kleen, P Kvistborg, ...
Journal for immunotherapy of cancer 4, 1-25, 2016
2582016
Transcriptional patterns, biomarkers and pathways characterizing nasopharyngeal carcinoma of Southern China
W Fang, X Li, Q Jiang, Z Liu, H Yang, S Wang, S Xie, Q Liu, T Liu, ...
Journal of translational medicine 6, 1-13, 2008
2422008
TPM, FPKM, or normalized counts? A comparative study of quantification measures for the analysis of RNA-seq data from the NCI patient-derived models repository
Y Zhao, MC Li, MM Konaté, L Chen, B Das, C Karlovich, PM Williams, ...
Journal of translational medicine 19 (1), 269, 2021
1982021
A signature of immune function genes associated with recurrence-free survival in breast cancer patients
ML Ascierto, M Kmieciak, MO Idowu, R Manjili, Y Zhao, M Grimes, ...
Breast cancer research and treatment 131, 871-880, 2012
1782012
Application of support vector machines for T-cell epitopes prediction
Y Zhao, C Pinilla, D Valmori, R Martin, R Simon
Bioinformatics 19 (15), 1978-1984, 2003
1682003
Strengths and limitations of laboratory procedures for microRNA detection
J Koshiol, E Wang, Y Zhao, F Marincola, MT Landi
Cancer epidemiology, biomarkers & prevention 19 (4), 907-911, 2010
1662010
HLA-DR15 molecules jointly shape an autoreactive T cell repertoire in multiple sclerosis
J Wang, I Jelcic, L Mühlenbruch, V Haunerdinger, NC Toussaint, Y Zhao, ...
Cell 183 (5), 1264-1281. e20, 2020
1622020
CXCR3/CCR5 pathways in metastatic melanoma patients treated with adoptive therapy and interleukin-2
D Bedognetti, TL Spivey, Y Zhao, L Uccellini, S Tomei, ME Dudley, ...
British journal of cancer 109 (9), 2412-2423, 2013
1472013
How large a training set is needed to develop a classifier for microarray data?
KK Dobbin, Y Zhao, RM Simon
Clinical Cancer Research 14 (1), 108-114, 2008
1472008
Crystal Structure Implies That Cyclophilin Predominantly Catalyzes the Trans to Cis Isomerization,
Y Zhao, H Ke
Biochemistry 35 (23), 7356-7361, 1996
1331996
Combinatorial peptide libraries and biometric score matrices permit the quantitative analysis of specific and degenerate interactions between clonotypic TCR and MHC peptide ligands
Y Zhao, B Gran, C Pinilla, S Markovic-Plese, B Hemmer, A Tzou, ...
The Journal of Immunology 167 (4), 2130-2141, 2001
1222001
Common cancer biomarkers
CF Basil, Y Zhao, K Zavaglia, P Jin, MC Panelli, S Voiculescu, ...
Cancer research 66 (6), 2953-2961, 2006
1212006
BRB-ArrayTools Data Archive for human cancer gene expression: a unique and efficient data sharing resource
Y Zhao, R Simon
Cancer informatics 6, CIN. S448, 2008
1192008
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