| MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020 | 335 | 2020 |
| Recon 2.2: from reconstruction to model of human metabolism N Swainston, K Smallbone, H Hefzi, PD Dobson, J Brewer, M Hanscho, ... Metabolomics 12, 1-7, 2016 | 308 | 2016 |
| A consensus genome-scale reconstruction of Chinese hamster ovary cell metabolism H Hefzi, KS Ang, M Hanscho, A Bordbar, D Ruckerbauer, M Lakshmanan, ... Cell systems 3 (5), 434-443. e8, 2016 | 238 | 2016 |
| Genome and evolution of the shade‐requiring medicinal herb Panax ginseng NH Kim, M Jayakodi, SC Lee, BS Choi, W Jang, J Lee, HH Kim, ... Plant Biotechnology Journal 16 (11), 1904-1917, 2018 | 152 | 2018 |
| Software applications for flux balance analysis M Lakshmanan, G Koh, BKS Chung, DY Lee Briefings in bioinformatics 15 (1), 108-122, 2014 | 112 | 2014 |
| Mammalian systems biotechnology reveals global cellular adaptations in a recombinant CHO cell line FNK Yusufi, M Lakshmanan, YS Ho, BLW Loo, P Ariyaratne, Y Yang, ... Cell systems 4 (5), 530-542. e6, 2017 | 101 | 2017 |
| Ginseng Genome Database: an open-access platform for genomics of Panax ginseng M Jayakodi, BS Choi, SC Lee, NH Kim, JY Park, W Jang, M Lakshmanan, ... BMC plant biology 18, 1-7, 2018 | 85 | 2018 |
| Elucidating rice cell metabolism under flooding and drought stresses using flux-based modeling and analysis M Lakshmanan, Z Zhang, B Mohanty, JY Kwon, HY Choi, HJ Nam, DI Kim, ... Plant physiology 162 (4), 2140-2150, 2013 | 78 | 2013 |
| Kinetic modeling of mammalian cell culture bioprocessing: the quest to advance biomanufacturing S Kyriakopoulos, KS Ang, M Lakshmanan, Z Huang, S Yoon, R Gunawan, ... Biotechnology Journal 13 (3), 1700229, 2018 | 77 | 2018 |
| Genome-scale model-driven strain design for dicarboxylic acid production in Yarrowia lipolytica P Mishra, NR Lee, M Lakshmanan, M Kim, BG Kim, DY Lee BMC systems biology 12, 9-20, 2018 | 71 | 2018 |
| Unraveling the Light-Specific Metabolic and Regulatory Signatures of Rice through Combined in Silico Modeling and Multiomics Analysis M Lakshmanan, SH Lim, B Mohanty, JK Kim, SH Ha, DY Lee Plant Physiology 169 (4), 3002-3020, 2015 | 70 | 2015 |
| Genome‐scale metabolic modeling and in silico analysis of lipid accumulating yeast Candida tropicalis for dicarboxylic acid production P Mishra, GY Park, M Lakshmanan, HS Lee, H Lee, MW Chang, ... Biotechnology and bioengineering 113 (9), 1993-2004, 2016 | 62 | 2016 |
| Memote: A community driven effort towards a standardized genome-scale metabolic model test suite C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... BioRxiv, 350991, 2018 | 59 | 2018 |
| Enzyme capacity-based genome scale modelling of CHO cells HC Yeo, J Hong, M Lakshmanan, DY Lee Metabolic engineering 60, 138-147, 2020 | 51 | 2020 |
| Transcriptomics‐based strain optimization tool for designing secondary metabolite overproducing strains of Streptomyces coelicolor M Kim, JS Yi, M Lakshmanan, DY Lee, BG Kim Biotechnology and Bioengineering 113 (3), 651-660, 2016 | 50 | 2016 |
| Towards next generation CHO cell line development and engineering by systems approaches JK Hong, M Lakshmanan, C Goudar, DY Lee Current Opinion in Chemical Engineering 22, 1-10, 2018 | 46 | 2018 |
| Multi‐omics profiling of CHO parental hosts reveals cell line‐specific variations in bioprocessing traits M Lakshmanan, YJ Kok, AP Lee, S Kyriakopoulos, HL Lim, G Teo, SL Poh, ... Biotechnology and bioengineering 116 (9), 2117-2129, 2019 | 45 | 2019 |
| Identification of candidate network hubs involved in metabolic adjustments of rice under drought stress by integrating transcriptome data and genome-scale metabolic network B Mohanty, A Kitazumi, CYM Cheung, M Lakshmanan, BG de Los Reyes, ... Plant Science 242, 224-239, 2016 | 40 | 2016 |
| Genome-scale modeling and transcriptome analysis of Leuconostoc mesenteroides unravel the redox governed metabolic states in obligate heterofermentative … L Koduru, Y Kim, J Bang, M Lakshmanan, NS Han, DY Lee Scientific reports 7 (1), 15721, 2017 | 39 | 2017 |
| Metabolic modeling of microbial community interactions for health, environmental and biotechnological applications KS Ang, M Lakshmanan, NR Lee, DY Lee Current Genomics 19 (8), 712-722, 2018 | 34 | 2018 |
Dong-Yup LeeAssociate Professor, School of Chemical Engineering, Sungkyunkwan UniversityVerified email at skku.edu
