AVPpred: collection and prediction of highly effective antiviral peptides N Thakur, A Qureshi, M Kumar Nucleic acids research 40 (W1), W199-W204, 2012 | 254 | 2012 |
AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses A Qureshi, N Thakur, H Tandon, M Kumar Nucleic acids research 42 (D1), D1147-D1153, 2014 | 214 | 2014 |
IBEX: A versatile multiplex optical imaging approach for deep phenotyping and spatial analysis of cells in complex tissues AJ Radtke, E Kandov, B Lowekamp, E Speranza, CJ Chu, A Gola, ... Proceedings of the National Academy of Sciences 117 (52), 33455-33465, 2020 | 115 | 2020 |
VIRmiRNA: a comprehensive resource for experimentally validated viral miRNAs and their targets A Qureshi, N Thakur, I Monga, A Thakur, M Kumar Database 2014, bau103, 2014 | 102 | 2014 |
HIPdb: a database of experimentally validated HIV inhibiting peptides A Qureshi, N Thakur, M Kumar PloS one 8 (1), e54908, 2013 | 100 | 2013 |
VIRsiRNAdb: a curated database of experimentally validated viral siRNA/shRNA N Thakur, A Qureshi, M Kumar Nucleic acids research 40 (D1), D230-D236, 2012 | 76* | 2012 |
A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes O Zugasti, N Thakur, J Belougne, B Squiban, CL Kurz, J Soulé, S Omi, ... BMC biology 14, 1-25, 2016 | 58 | 2016 |
IBEX: an iterative immunolabeling and chemical bleaching method for high-content imaging of diverse tissues AJ Radtke, CJ Chu, Z Yaniv, L Yao, J Marr, RT Beuschel, H Ichise, A Gola, ... Nature protocols 17 (2), 378-401, 2022 | 50 | 2022 |
Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes K Lebrigand, LD He, N Thakur, MJ Arguel, J Polanowska, B Henrissat, ... PLoS genetics 12 (5), e1006017, 2016 | 49 | 2016 |
VIRsiRNApred: a web server for predicting inhibition efficacy of siRNAs targeting human viruses A Qureshi, N Thakur, M Kumar Journal of Translational Medicine 11, 1-12, 2013 | 47 | 2013 |
HIVsirDB: a database of HIV inhibiting siRNAs A Tyagi, F Ahmed, N Thakur, A Sharma, GPS Raghava, M Kumar PloS one 6 (10), e25917, 2011 | 47 | 2011 |
Coordinated inhibition of C/EBP by Tribbles in multiple tissues is essential for Caenorhabditis elegans development KW Kim, N Thakur, CA Piggott, S Omi, J Polanowska, Y Jin, N Pujol BMC biology 14, 1-15, 2016 | 33 | 2016 |
Modulatory upregulation of an insulin peptide gene by different pathogens in C. elegans SH Lee, S Omi, N Thakur, C Taffoni, J Belougne, I Engelmann, JJ Ewbank, ... Virulence 9 (1), 648-658, 2018 | 28 | 2018 |
ASPsiRNA: a resource of ASP-siRNAs having therapeutic potential for human genetic disorders and algorithm for prediction of their inhibitory efficacy I Monga, A Qureshi, N Thakur, AK Gupta, M Kumar G3: Genes, Genomes, Genetics 7 (9), 2931-2943, 2017 | 19 | 2017 |
Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans N Thakur, N Pujol, L Tichit, JJ Ewbank G3: Genes, Genomes, Genetics 4 (11), 2137-2145, 2014 | 15 | 2014 |
Understanding immunity in a tissue‐centric context: Combining novel imaging methods and mathematics to extract new insights into function and dysfunction RN Germain, AJ Radtke, N Thakur, EC Schrom, JL Hor, H Ichise, ... Immunological Reviews 306 (1), 8-24, 2022 | 9 | 2022 |
IBEX: an open and extensible method for high content multiplex imaging of diverse tissues AJ Radtke, CJ Chu, Z Yaniv, L Yao, J Marr, RT Beuschel, H Ichise, A Gola, ... arXiv preprint arXiv:2107.11364, 2021 | 2 | 2021 |
ifas-1 is upregulated by fungal infection in a GPA-12 and STA-2-independent manner in the Caenorhabditis elegans epidermis S Omi, X Zhang, N Thakur, N Pujol Micropublication Biology 2021, 2021 | 2 | 2021 |
Integrated signaling networks in C. elegans innate immunity N Thakur Aix-Marseille, 2016 | 1 | 2016 |
Spatial Patterning Analysis of Cellular Ensembles (SPACE) enables statistically robust discovery of complex spatial organization at the cell and tissue level EC Schrom, EF McCaffrey, AJ Radtke, E Speranza, L Arakkal, N Thakur, ... bioRxiv, 2023.12. 08.570837, 2023 | | 2023 |