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Tapio Lönnberg
Tapio Lönnberg
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Cited by
Year
A practical guide to single-cell RNA-sequencing for biomedical research and clinical applications
A Haque, J Engel, SA Teichmann, T Lönnberg
Genome medicine 9, 1-12, 2017
9042017
T cell fate and clonality inference from single-cell transcriptomes
MJT Stubbington, T Lönnberg, V Proserpio, S Clare, AO Speak, ...
Nature methods 13 (4), 329-332, 2016
4362016
Microanatomy of the human atherosclerotic plaque by single-cell transcriptomics
MAC Depuydt, KHM Prange, L Slenders, T Örd, D Elbersen, A Boltjes, ...
Circulation research 127 (11), 1437-1455, 2020
3232020
Single-cell RNA-seq and computational analysis using temporal mixture modeling resolves TH1/TFH fate bifurcation in malaria
T Lönnberg, V Svensson, KR James, D Fernandez-Ruiz, I Sebina, ...
Science immunology 2 (9), eaal2192, 2017
2752017
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils
A Takeda, M Hollmén, D Dermadi, J Pan, KF Brulois, R Kaukonen, ...
Immunity 51 (3), 561-572. e5, 2019
1552019
Global chromatin state analysis reveals lineage-specific enhancers during the initiation of human T helper 1 and T helper 2 cell polarization
RD Hawkins, A Larjo, SK Tripathi, U Wagner, Y Luu, T Lönnberg, ...
Immunity 38 (6), 1271-1284, 2013
1042013
Single‐cell technologies are revolutionizing the approach to rare cells
V Proserpio, T Lönnberg
Immunology and cell biology 94 (3), 225-229, 2016
912016
Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation
V Proserpio, A Piccolo, L Haim-Vilmovsky, G Kar, T Lönnberg, ...
Genome biology 17, 1-15, 2016
672016
Single-cell epigenomics and functional fine-mapping of atherosclerosis GWAS loci
T Örd, K Õunap, LK Stolze, R Aherrahrou, V Nurminen, A Toropainen, ...
Circulation research 129 (2), 240-258, 2021
612021
Quantitative proteomics analysis of the nuclear fraction of human CD4+ cells in the early phases of IL-4-induced Th2 differentiation
R Moulder, T Lönnberg, LL Elo, JJ Filen, E Rainio, G Corthals, M Oresic, ...
Molecular & Cellular Proteomics 9 (9), 1937-1953, 2010
572010
Early detection of peripheral blood cell signature in children developing β-cell autoimmunity at a young age
H Kallionpää, J Somani, S Tuomela, U Ullah, R De Albuquerque, ...
Diabetes 68 (10), 2024-2034, 2019
472019
Single-cell RNA-sequencing resolves self-antigen expression during mTEC development
RJ Miragaia, X Zhang, T Gomes, V Svensson, T Ilicic, J Henriksson, G Kar, ...
Scientific reports 8 (1), 685, 2018
462018
An integrative computational systems biology approach identifies differentially regulated dynamic transcriptome signatures which drive the initiation of human T helper cell …
T Äijö, SM Edelman, T Lönnberg, A Larjo, H Kallionpää, S Tuomela, ...
BMC genomics 13, 1-20, 2012
452012
Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory
MSF Soon, HJ Lee, JA Engel, J Straube, BS Thomas, CPS Pernold, ...
Nature Immunology 21 (12), 1597-1610, 2020
432020
Global and targeted approaches to single-cell transcriptome characterization
AA Kolodziejczyk, T Lönnberg
Briefings in functional genomics 17 (4), 209-219, 2018
352018
Systemic blockade of clever-1 elicits lymphocyte activation alongside checkpoint molecule downregulation in patients with solid tumors: results from a phase I/II clinical trial
R Virtakoivu, JH Rannikko, M Viitala, F Vaura, A Takeda, T Lönnberg, ...
Clinical Cancer Research 27 (15), 4205-4220, 2021
342021
Peripheral blood DNA methylation differences in twin pairs discordant for Alzheimer’s disease
M Konki, M Malonzo, IK Karlsson, N Lindgren, B Ghimire, J Smolander, ...
Clinical epigenetics 11, 1-12, 2019
282019
Single-cell characterization of leukemic and non-leukemic immune repertoires in CD8+ T-cell large granular lymphocytic leukemia
J Huuhtanen, D Bhattacharya, T Lönnberg, M Kankainen, C Kerr, ...
Nature Communications 13 (1), 1981, 2022
272022
Somatic mTOR mutation in clonally expanded T lymphocytes associated with chronic graft versus host disease
D Kim, G Park, J Huuhtanen, S Lundgren, RK Khajuria, AM Hurtado, ...
Nature communications 11 (1), 1-17, 2020
262020
Single cell characterization of B-lymphoid differentiation and leukemic cell states during chemotherapy in ETV6-RUNX1-positive pediatric leukemia identifies drug-targetable …
J Mehtonen, S Teppo, M Lahnalampi, A Kokko, R Kaukonen, L Oksa, ...
Genome Medicine 12, 1-25, 2020
252020
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