| Exon skipping is correlated with exon circularization S Kelly, C Greenman, PR Cook, A Papantonis Journal of molecular biology 427 (15), 2414-2417, 2015 | 226 | 2015 |
| Transcription factories: genome organization and gene regulation A Papantonis, PR Cook Chemical reviews 113 (11), 8683-8705, 2013 | 181 | 2013 |
| Recent Zika virus isolates induce premature differentiation of neural progenitors in human brain organoids E Gabriel, A Ramani, U Karow, M Gottardo, K Natarajan, LM Gooi, ... Cell stem cell 20 (3), 397-406. e5, 2017 | 177 | 2017 |
| A wave of nascent transcription on activated human genes Y Wada, Y Ohta, M Xu, S Tsutsumi, T Minami, K Inoue, D Komura, ... Proceedings of the National Academy of Sciences 106 (43), 18357-18361, 2009 | 174 | 2009 |
| Nonspecific bridging-induced attraction drives clustering of DNA-binding proteins and genome organization CA Brackley, S Taylor, A Papantonis, PR Cook, D Marenduzzo Proceedings of the National Academy of Sciences 110 (38), E3605-E3611, 2013 | 147 | 2013 |
| Enhancers and silencers: an integrated and simple model for their function P Kolovos, TA Knoch, FG Grosveld, PR Cook, A Papantonis Epigenetics & chromatin 5 (1), 1-8, 2012 | 133 | 2012 |
| TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed A Papantonis, T Kohro, S Baboo, JD Larkin, B Deng, P Short, S Tsutsumi, ... The EMBO journal 31 (23), 4404-4414, 2012 | 110 | 2012 |
| Active RNA polymerases: mobile or immobile molecular machines? A Papantonis, JD Larkin, Y Wada, Y Ohta, S Ihara, T Kodama, PR Cook PLoS Biol 8 (7), e1000419, 2010 | 104 | 2010 |
| The proteomes of transcription factories containing RNA polymerases I, II or III S Melnik, B Deng, A Papantonis, S Baboo, IM Carr, PR Cook Nature methods 8 (11), 963-968, 2011 | 81 | 2011 |
| HMGB2 loss upon senescence entry disrupts genomic organization and induces CTCF clustering across cell types A Zirkel, M Nikolic, K Sofiadis, JP Mallm, CA Brackley, H Gothe, ... Molecular cell 70 (4), 730-744. e6, 2018 | 63 | 2018 |
| Spatial chromosome folding and active transcription drive DNA fragility and formation of oncogenic MLL translocations HJ Gothe, BAM Bouwman, EG Gusmao, R Piccinno, G Petrosino, ... Molecular cell 75 (2), 267-283. e12, 2019 | 55 | 2019 |
| Forces driving the three‐dimensional folding of eukaryotic genomes A Rada‐Iglesias, FG Grosveld, A Papantonis Molecular systems biology 14 (6), e8214, 2018 | 52 | 2018 |
| Genome architecture and the role of transcription A Papantonis, PR Cook Current opinion in cell biology 22 (3), 271-276, 2010 | 52 | 2010 |
| Senescence‐associated DNA methylation is stochastically acquired in subpopulations of mesenchymal stem cells J Franzen, A Zirkel, J Blake, B Rath, V Benes, A Papantonis, W Wagner Aging cell 16 (1), 183-191, 2017 | 50 | 2017 |
| Fixing the model for transcription: the DNA moves, not the polymerase A Papantonis, PR Cook Transcription 2 (1), 41-44, 2011 | 43 | 2011 |
| Dynamic reconfiguration of long human genes during one transcription cycle JD Larkin, PR Cook, A Papantonis Molecular and cellular biology 32 (14), 2738-2747, 2012 | 41 | 2012 |
| Exploiting native forces to capture chromosome conformation in mammalian cell nuclei L Brant, T Georgomanolis, M Nikolic, CA Brackley, P Kolovos, ... Molecular systems biology 12 (12), 891, 2016 | 37 | 2016 |
| Shaping epigenetic memory via genomic bookmarking D Michieletto, M Chiang, D Coli, A Papantonis, E Orlandini, PR Cook, ... Nucleic acids research 46 (1), 83-93, 2018 | 35 | 2018 |
| TNFα signalling primes chromatin for NF-κB binding and induces rapid and widespread nucleosome repositioning S Diermeier, P Kolovos, L Heizinger, U Schwartz, T Georgomanolis, ... Genome biology 15 (12), 1-13, 2014 | 32 | 2014 |
| Splicing of many human genes involves sites embedded within introns S Kelly, T Georgomanolis, A Zirkel, S Diermeier, D O'Reilly, S Murphy, ... Nucleic acids research 43 (9), 4721-4732, 2015 | 27 | 2015 |
