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Xin Deng
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A comprehensive overview of computational protein disorder prediction methods
X Deng, J Eickholt, J Cheng
Molecular BioSystems 8 (1), 114-121, 2012
1202012
PreDisorder: ab initio sequence-based prediction of protein disordered regions
X Deng, J Eickholt, J Cheng
BMC bioinformatics 10, 1-6, 2009
1082009
DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
J Eickholt, X Deng, J Cheng
BMC bioinformatics 12, 1-8, 2011
762011
WeFold: a coopetition for protein structure prediction
GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ...
Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014
732014
The MULTICOM toolbox for protein structure prediction
J Cheng, J Li, Z Wang, J Eickholt, X Deng
BMC bioinformatics 13, 1-12, 2012
472012
MSACompro: protein multiple sequence alignment using predicted secondary structure, solvent accessibility, and residue-residue contacts
X Deng, J Cheng
BMC bioinformatics 12, 1-16, 2011
392011
Designing and benchmarking the MULTICOM protein structure prediction system
J Li, X Deng, J Eickholt, J Cheng
BMC structural biology 13, 1-14, 2013
292013
Reconstructing differentially co-expressed gene modules and regulatory networks of soybean cells
M Zhu, X Deng, T Joshi, D Xu, G Stacey, J Cheng
BMC genomics 13, 1-13, 2012
292012
An overview of practical applications of protein disorder prediction and drive for faster, more accurate predictions
X Deng, J Gumm, S Karki, J Eickholt, J Cheng
International journal of molecular sciences 16 (7), 15384-15404, 2015
262015
The MULTICOM protein tertiary structure prediction system
J Li, D Bhattacharya, R Cao, B Adhikari, X Deng, J Eickholt, J Cheng
Protein Structure Prediction, 29-41, 2014
182014
Enhancing HMM-based protein profile-profile alignment with structural features and evolutionary coupling information
X Deng, J Cheng
BMC bioinformatics 15, 1-11, 2014
132014
Improving grounded language understanding in a collaborative environment by interacting with agents through help feedback
N Mehta, M Teruel, PF Sanz, X Deng, AH Awadallah, J Kiseleva
arXiv preprint arXiv:2304.10750, 2023
122023
Recursive protein modeling: a divide and conquer strategy for protein structure prediction and its case study in CASP9
J Cheng, J Eickholt, Z Wang, X Deng
Journal of bioinformatics and computational biology 10 (03), 1242003, 2012
122012
Big data technology and ethics considerations in customer behavior and customer feedback mining
X Deng
2017 IEEE International Conference on Big Data (Big Data), 3924-3927, 2017
112017
Predicting protein model quality from sequence alignments by support vector machines
X Deng, J Li, J Cheng
Journal of proteomics & bioinformatics, 2013
62013
Semi-Supervised Learning Approach to Discover Enterprise User Insights from Feedback and Support
X Deng, R Smith, G Quintin
arXiv, 2020
42020
A Contact-Assisted Approach to Protein Structure Prediction and Its Assessment in CASP10
B Adhikari, D Bhattacharya, X Deng, J Li, J Cheng
Workshops at the Twenty-Seventh AAAI Conference on Artificial Intelligence, 2013
42013
Recursive protein modeling: a divide and conquer strategy for protein structure prediction and its case study in CASP9
J Cheng, Z Wang, J Eickholt, X Deng
2011 IEEE International Conference on Bioinformatics and Biomedicine …, 2011
42011
MSACompro: improving multiple protein sequence alignment by predicted structural features
X Deng, J Cheng
Multiple Sequence Alignment Methods, 273-283, 2014
32014
Big data and predictive modeling topics in healthcare
X Deng, D Wu
Proceedings of the 6th ACM Conference on Bioinformatics, Computational …, 2015
22015
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Articles 1–20