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Michael James Clark
Michael James Clark
Bioinformatics Applications Manager, Personalis
Verified email at stanford.edu
Title
Cited by
Cited by
Year
Personal omics profiling reveals dynamic molecular and medical phenotypes
R Chen, GI Mias, J Li-Pook-Than, L Jiang, HYK Lam, R Chen, E Miriami, ...
Cell 148 (6), 1293-1307, 2012
13542012
Performance comparison of exome DNA sequencing technologies
MJ Clark, R Chen, HYK Lam, KJ Karczewski, R Chen, G Euskirchen, ...
Nature biotechnology 29 (10), 908-914, 2011
5882011
The unfolded protein response is an important regulator of inflammatory genes in endothelial cells
PS Gargalovic, NM Gharavi, MJ Clark, J Pagnon, WP Yang, A He, ...
Arteriosclerosis, thrombosis, and vascular biology 26 (11), 2490-2496, 2006
4412006
U87MG decoded: the genomic sequence of a cytogenetically aberrant human cancer cell line
MJ Clark, N Homer, BD O'Connor, Z Chen, A Eskin, H Lee, B Merriman, ...
PLoS Genetics 6 (1), e1000832, 2010
3862010
Identification of inflammatory gene modules based on variations of human endothelial cell responses to oxidized lipids
PS Gargalovic, M Imura, B Zhang, NM Gharavi, MJ Clark, J Pagnon, ...
Proceedings of the National Academy of Sciences 103 (34), 12741-12746, 2006
3832006
Performance comparison of whole-genome sequencing platforms
HYK Lam, MJ Clark, R Chen, R Chen, G Natsoulis, M O'huallachain, ...
Nature biotechnology 30 (1), 78-82, 2012
3582012
Mutations in NGLY1 cause an inherited disorder of the endoplasmic reticulum–associated degradation pathway
GM Enns, V Shashi, M Bainbridge, MJ Gambello, FR Zahir, T Bast, ...
Genetics in Medicine 16 (10), 751-758, 2014
2232014
Detecting and annotating genetic variations using the HugeSeq pipeline
HYK Lam, C Pan, MJ Clark, P Lacroute, R Chen, R Haraksingh, ...
Nature biotechnology 30 (3), 226-229, 2012
1452012
High-density lipoprotein modulates oxidized phospholipid signaling in human endothelial cells from proinflammatory to anti-inflammatory
NM Gharavi, PS Gargalovic, I Chang, JA Araujo, MJ Clark, WL Szeto, ...
Arteriosclerosis, thrombosis, and vascular biology 27 (6), 1346-1353, 2007
622007
Comprehensive whole-genome sequencing of an early-stage primary myelofibrosis patient defines low mutational burden and non-recurrent candidate genes
JD Merker, KM Roskin, D Ng, C Pan, DG Fisk, JJ King, R Hoh, M Stadler, ...
Haematologica 98 (11), 1689, 2013
142013
Exome sequencing by targeted enrichment
MJ Clark, R Chen, M Snyder
Current Protocols in Molecular Biology 102 (1), 7.12. 1-7.12. 21, 2013
52013
Gharavi NM. Clark MJ. Pagnon J. Yang WP. He A. Truong A. Baruch-Oren T. Berliner JA. Kirchgessner TG. Lusis AJ. The unfolded protein response is an important regulator of …
G PS
Arterioscler Thromb Vasc Biol 26, 2490-2496, 2006
22006
Variant priorization and analysis incorporating problematic regions of the genome
A Patwardhan, M Clark, A Morgan, S Chervitz, M Pratt, G Bartha, ...
Biocomputing 2014, 277-287, 2014
12014
Whole Genome Sequence Analysis of Primary Myelofibrosis.
JD Merker, K Roskin, D Ng, C Pan, DG Fisk, CD Jones, L Gojenola, ...
Blood, The Journal of the American Society of Hematology 120 (21), 2863-2863, 2012
12012
Approaches to Increase Diagnostic Yield for Clinical Genomic Sequencing
ST Garcia, G Chandratillake, M Pratt, H Lam, J Harris, S Luo, G Bertha, ...
JOURNAL OF MOLECULAR DIAGNOSTICS 15 (6), 856-856, 2013
2013
Assessing mutations in cancer by second-generation genome sequencing
MJ Clark
University of California, Los Angeles, 2010
2010
Human genetic variation modulates endothelial responses to oxidized lipids revealing the link between the unfolded protein response and inflammation
P Gargalovic, M Imura, B Zhang, NM Gharavi, MJ Clark, J Pagnon, ...
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY 26 (5), E50-E50, 2006
2006
Oxidized phospholipids mediate the induction of unfolded protein response in human aortic endothelial cells: Athero-protective role of HDL
PS Gargalovic, NM Gharavi, MJ Clark, WP Yang, AG He, A Truong, ...
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY 25 (5), E46-E47, 2005
2005
Correction to the algorithm for calculating acidifying potential of atmospheric deposition as corrected for sea-salt: Brydges, TG and Summers, PW: Water, Air, and Soil Pollut …
M Kotturi, MJR Clark
Water, Air, and Soil Pollution 52, 397-398, 1990
1990
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Articles 1–19