Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ... Cell 164 (3), 550-563, 2016 | 1513 | 2016 |
TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages TC Silva, A Colaprico, C Olsen, F D'Angelo, G Bontempi, M Ceccarelli, ... F1000Research 5, 2016 | 140 | 2016 |
The molecular landscape of glioma in patients with Neurofibromatosis 1 F D¡¯Angelo, M Ceccarelli, L Garofano, J Zhang, V Frattini, FP Caruso, ... Nature medicine 25 (1), 176-187, 2019 | 121 | 2019 |
Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 112 | 2021 |
Pathway-based classification of glioblastoma uncovers a mitochondrial subtype with therapeutic vulnerabilities L Garofano, S Migliozzi, YT Oh, F D¡¯Angelo, RD Najac, A Ko, B Frangaj, ... Nature Cancer, 1-16, 2021 | 75 | 2021 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer Cell, 2021 | 75 | 2021 |
Evaluation of low doses BPA-induced perturbation of glycemia by toxicogenomics points to a primary role of pancreatic islets and to the mechanism of toxicity E Carchia, I Porreca, PJ Almeida, F D'angelo, D Cuomo, M Ceccarelli, ... Cell death & disease 6 (10), e1959-e1959, 2015 | 50 | 2015 |
¡°Stockpile¡± of slight transcriptomic changes determines the indirect genotoxicity of low-dose BPA in thyroid cells I Porreca, L Ulloa Severino, F D¡¯Angelo, D Cuomo, M Ceccarelli, L Altucci, ... PloS one 11 (3), e0151618, 2016 | 30 | 2016 |
Transcriptional landscape of mouse-aged ovaries reveals a unique set of non-coding RNAs associated with physiological and environmental ovarian dysfunctions D Cuomo, I Porreca, M Ceccarelli, DW Threadgill, WT Barrington, ... Cell death discovery 4 (1), 1-14, 2018 | 19 | 2018 |
A map of tumor–host interactions in glioma at single-cell resolution FP Caruso, L Garofano, F D'Angelo, K Yu, F Tang, J Yuan, J Zhang, ... Gigascience 9 (10), giaa109, 2020 | 18 | 2020 |
Changes of the hepatic proteome in hepatitis B-infected mouse model at early stages of fibrosis D Spano, F Cimmino, M Capasso, F D¡¯Angelo, N Zambrano, ... Journal of proteome research 7 (7), 2642-2653, 2008 | 18 | 2008 |
Pesticide toxicogenomics across scales: in vitro transcriptome predicts mechanisms and outcomes of exposure in vivo. I Porreca, F D'Angelo, LD Franceschi, A Mattè, M Ceccarelli, A Iolascon, ... Scientific Reports 6, 2016 | 17 | 2016 |
Proline hydroxylation primes protein kinases for autophosphorylation and activation SB Lee, A Ko, YT Oh, P Shi, F D¡¯Angelo, B Frangaj, A Koller, EI Chen, ... Molecular cell 79 (3), 376-389. e8, 2020 | 14 | 2020 |
Novel pancreas organogenesis markers refine the pancreatic differentiation roadmap of embryonic stem cells MT De Angelis, F Russo, F D¡¯Angelo, A Federico, M Gemei, L Del Vecchio, ... Stem Cell Reviews and Reports 10 (2), 269-279, 2014 | 14 | 2014 |
Differential community detection in paired biological networks R Mall, E Ullah, K Kunji, F D'Angelo, H Bensmail, M Ceccarelli Proceedings of the 8th ACM International Conference on Bioinformatics ¡¦, 2017 | 12 | 2017 |
DNAJC17 is localized in nuclear speckles and interacts with splicing machinery components A Pascarella, G Ferrandino, SC Credendino, C Moccia, F D¡¯Angelo, ... Scientific Reports 8 (1), 1-13, 2018 | 10 | 2018 |
Cross-species toxicogenomic analyses and phenotypic anchoring in response to groundwater low-level pollution I Porreca, F D¡¯Angelo, D Gentilcore, E Carchia, A Amoresano, A Affuso, ... BMC genomics 15 (1), 1-14, 2014 | 10 | 2014 |
3, 5, 3¡Ç-triiodo-L-thyronine-and 3, 5-diiodo-L-thyronine-affected metabolic pathways in liver of LDL receptor deficient mice M Moreno, E Silvestri, M Coppola, IJ Goldberg, LS Huang, AM Salzano, ... Frontiers in physiology 7, 545, 2016 | 9 | 2016 |
Modulation of Nogo receptor 1 expression orchestrates myelin-associated infiltration of glioblastoma JH Hong, S Kang, JK Sa, G Park, YT Oh, TH Kim, J Yin, SS Kim, ... Brain 144 (2), 636-654, 2021 | 7 | 2021 |
Temporospatial genomic profiling in glioblastoma identifies commonly altered core pathways underlying tumor progression MR Blomquist, SF Ensign, F D¡¯Angelo, JJ Phillips, M Ceccarelli, S Peng, ... Neuro-oncology advances 2 (1), vdaa078, 2020 | 7 | 2020 |