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Minji Jeon
Minji Jeon
Department of Biomedical Informatics, Korea University College of Medicine
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Gene Set Knowledge Discovery with Enrichr
Z Xie, A Bailey, MV Kuleshov, DJB Clarke, JE Evangelista, SL Jenkins, ...
Current Protocols 1 (3), e90, 2021
21712021
DSigDB: drug signatures database for gene set analysis
M Yoo, J Shin, J Kim, KA Ryall, K Lee, S Lee, M Jeon, J Kang, AC Tan
Bioinformatics 31 (18), 3069-3071, 2015
4122015
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 2674, 2019
337*2019
Assessment of network module identification across complex diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
Nature methods 16 (9), 843-852, 2019
2772019
BEST: next-generation biomedical entity search tool for knowledge discovery from biomedical literature
S Lee, D Kim, K Lee, J Choi, S Kim, M Jeon, S Lim, D Choi, S Kim, AC Tan, ...
PloS one 11 (10), e0164680, 2016
1142016
Can Language Models be Biomedical Knowledge Bases?
M Sung, J Lee, S Yi, M Jeon, S Kim, J Kang
arXiv preprint arXiv:2109.07154, 2021
992021
Appyters: Turning Jupyter Notebooks into data-driven web apps
DJB Clarke, M Jeon, DJ Stein, N Moiseyev, E Kropiwnicki, C Dai, Z Xie, ...
Patterns 2 (3), 2021
932021
In silico drug combination discovery for personalized cancer therapy
M Jeon, S Kim, S Park, H Lee, J Kang
BMC systems biology 12, 59-67, 2018
732018
Crowdsourced mapping of unexplored target space of kinase inhibitors
A Cichońska, B Ravikumar, RJ Allaway, F Wan, S Park, O Isayev, S Li, ...
Nature communications 12 (1), 1-18, 2021
702021
ReSimNet: drug response similarity prediction using Siamese neural networks
M Jeon, D Park, J Lee, H Jeon, M Ko, S Kim, Y Choi, AC Tan, J Kang
Bioinformatics 35 (24), 5249-5256, 2019
532019
SigCom LINCS: data and metadata search engine for a million gene expression signatures
JE Evangelista, DJB Clarke, Z Xie, A Lachmann, M Jeon, K Chen, ...
Nucleic acids research 50 (W1), W697-W709, 2022
502022
Feasibility of using a mobile application for the monitoring and management of stroke-associated risk factors
WK Seo, J Kang, M Jeon, K Lee, S Lee, JH Kim, K Oh, SB Koh
Journal of Clinical Neurology (Seoul, Korea) 11 (2), 142, 2015
482015
BTNET: boosted tree based gene regulatory network inference algorithm using time-course measurement data
S Park, JM Kim, W Shin, SW Han, M Jeon, HJ Jang, IS Jang, J Kang
BMC systems biology 12, 69-77, 2018
422018
ARPNet: Antidepressant Response Prediction Network for Major Depressive Disorder
B Chang, Y Choi, M Jeon, J Lee, KM Han, A Kim, BJ Ham, J Kang
Genes 10 (11), 907, 2019
302019
Community Assessment of the Predictability of Cancer Protein and Phosphoprotein Levels from Genomics and Transcriptomics
M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ...
Cell Systems 11 (2), 186-195. e9, 2020
262020
A pilot study of biomedical text comprehension using an attention-based deep neural reader: Design and experimental analysis
S Kim, D Park, Y Choi, K Lee, B Kim, M Jeon, J Kim, AC Tan, J Kang
JMIR medical informatics 6 (1), e8751, 2018
242018
HiPub: translating PubMed and PMC texts to networks for knowledge discovery
K Lee, W Shin, B Kim, S Lee, Y Choi, S Kim, M Jeon, AC Tan, J Kang
Bioinformatics 32 (18), 2886-2888, 2016
232016
Drugmonizome and Drugmonizome-ML: integration and abstraction of small molecule attributes for drug enrichment analysis and machine learning
E Kropiwnicki, JE Evangelista, DJ Stein, DJB Clarke, A Lachmann, ...
Database 2021, baab017, 2021
222021
Transforming L1000 profiles to RNA-seq-like profiles with deep learning
M Jeon, Z Xie, JE Evangelista, ML Wojciechowicz, DJB Clarke, A Ma¡¯ayan
BMC bioinformatics 23 (1), 374, 2022
152022
Drug-drug interaction analysis using heterogeneous biological information network
K Lee, S Lee, M Jeon, J Choi, J Kang
2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-5, 2012
152012
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