Aleksandra A Kolodziejczyk
Aleksandra A Kolodziejczyk
Marie Curie Postdoctoral Fellow at Weizmann Institute of Science
Verified email at
Cited by
Cited by
Accounting for technical noise in single-cell RNA-seq experiments
P Brennecke, S Anders, JK Kim, AA Kołodziejczyk, X Zhang, V Proserpio, ...
Nature methods 10 (11), 1093, 2013
The technology and biology of single-cell RNA sequencing
AA Kolodziejczyk, JK Kim, V Svensson, JC Marioni, SA Teichmann
Molecular cell 58 (4), 610-620, 2015
Dysbiosis and the immune system
M Levy, AA Kolodziejczyk, CA Thaiss, E Elinav
Nature Reviews Immunology 17 (4), 219, 2017
Single cell RNA-sequencing of pluripotent states unlocks modular transcriptional variation
AA Kolodziejczyk, JK Kim, JCH Tsang, T Ilicic, J Henriksson, ...
Cell stem cell 17 (4), 471-485, 2015
Classification of low quality cells from single-cell RNA-seq data
T Ilicic, JK Kim, AA Kolodziejczyk, FO Bagger, DJ McCarthy, JC Marioni, ...
Genome biology 17 (1), 29, 2016
Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression
JK Kim, AA Kolodziejczyk, T Ilicic, SA Teichmann, JC Marioni
Nature communications 6 (1), 1-9, 2015
Single-cell RNA sequencing reveals T helper cells synthesizing steroids de novo to contribute to immune homeostasis
B Mahata, X Zhang, AA Kolodziejczyk, V Proserpio, L Haim-Vilmovsky, ...
Cell reports 7 (4), 1130-1142, 2014
Aging increases cell-to-cell transcriptional variability upon immune stimulation
CP Martinez-Jimenez, N Eling, HC Chen, CA Vallejos, AA Kolodziejczyk, ...
Science 355 (6332), 1433-1436, 2017
Bile acids in glucose metabolism in health and disease
H Shapiro, AA Kolodziejczyk, D Halstuch, E Elinav
Journal of Experimental Medicine 215 (2), 383-396, 2018
Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells
JCH Tsang, Y Yu, S Burke, F Buettner, C Wang, AA Kolodziejczyk, ...
Genome biology 16 (1), 178, 2015
Establishment of mouse expanded potential stem cells
J Yang, DJ Ryan, W Wang, JCH Tsang, G Lan, H Masaki, X Gao, ...
Nature 550 (7676), 393-397, 2017
The role of the microbiome in NAFLD and NASH
AA Kolodziejczyk, D Zheng, O Shibolet, E Elinav
EMBO molecular medicine 11 (2), 2019
Diet–microbiota interactions and personalized nutrition
AA Kolodziejczyk, D Zheng, E Elinav
Nature Reviews Microbiology, 1-12, 2019
Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression
G Kar, JK Kim, AA Kolodziejczyk, KN Natarajan, ET Triglia, B Mifsud, ...
Nature communications 8 (1), 1-14, 2017
Single cell transcriptomics of pluripotent stem cells: reprogramming and differentiation
KN Natarajan, SA Teichmann, AA Kolodziejczyk
Current opinion in genetics & development 46, 66-76, 2017
Global and targeted approaches to single-cell transcriptome characterization
AA Kolodziejczyk, T Lönnberg
Briefings in functional genomics 17 (4), 209-219, 2018
Cdk1 Controls Global Epigenetic Landscape in Embryonic Stem Cells
W Michowski, JM Chick, C Chu, A Kolodziejczyk, Y Wang, JM Suski, ...
Molecular Cell, 2020
Cell-type specialization in the brain is encoded by specific long-range chromatin topologies
W Winick-Ng, A Kukalev, I Harabulā, LZ Redondo, M Meijer, L Serebreni, ...
bioRxiv, 2020
# AStemCellScientistBecause
A Bond, S Haas, C Galonska, F D'Addio, L Hamilton, L Ho, M Iwasaki, ...
CELL STEM CELL 17 (4), 381-384, 2015
Dynamic transitions in gene expression states during neuronal differentiation: P03-064
T Triglia, C Ferrai, A Piccolo, T Rito, A Kolodziejczyk, G Kar, I Jaeger, ...
The Febs Journal 282, 2015
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