Pedro Ruas
Pedro Ruas
LASIGE, Faculdade de Ciências, Universidade de Lisboa
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Cutaneous leishmaniasis: the complexity of host’s effective immune response against a polymorphic parasitic disease
Á Gabriel, A Valério-Bolas, J Palma-Marques, P Mourata-Gonçalves, ...
Journal of immunology research 2019, 2019
PPR-SSM: personalized PageRank and semantic similarity measures for entity linking
A Lamurias, P Ruas, FM Couto
BMC bioinformatics 20 (1), 1-12, 2019
Linking chemical and disease entities to ontologies by integrating PageRank with extracted relations from literature
P Ruas, A Lamurias, FM Couto
Journal of Cheminformatics 12 (1), 1-11, 2020
NILINKER: Attention-based approach to NIL Entity Linking
P Ruas, FM Couto
Journal of Biomedical Informatics 132, 104137, 2022
An extended overview of the CLEF 2020 ChEMU lab: information extraction of chemical reactions from patents
J He, D Quoc Nguyen, SA Akhondi, C Druckenbrodt, C Thorne, R Hoessel, ...
Proceedings of CLEF (Conference and Labs of the Evaluation Forum) 2020 …, 2020
LasigeBioTM at CANTEMIST: Named Entity Recognition and Normalization of Tumour Morphology Entities and Clinical Coding of Spanish Health-related Documents.
P Ruas, A Neves, VDT Andrade, FM Couto, ME Aragón
IberLEF@ SEPLN, 422-437, 2020
Lasige-BioTM at ProfNER: BiLSTM-CRF and contextual Spanish embeddings for Named Entity Recognition and Tweet Binary Classification
P Ruas, V Andrade, FM Couto
Proceedings of the Sixth Social Media Mining for Health (# SMM4H) Workshop …, 2021
An extended overview of the CLEF 2020 ChEMU Lab
J He, DQ Nguyen, SA Akhondi, C Druckenbrodt, C Thorne, R Hoessel, ...
Proceedings of the CLEF 2020 conference, 2020
LasigeBioTM Team at CLEF2020 ChEMU Evaluation Lab: Named Entity Recognition and Event extraction from chemical reactions described in patents using BioBERT NER and RE.
P Ruas, A Lamurias, FM Couto
CLEF (Working Notes), 2020
LASIGE-BioTM at MESINESP2: entity linking with semantic similarity and extreme multi-label classification on Spanish biomedical documents.
P Ruas, VDT Andrade, FM Couto
CLEF (Working Notes), 324-334, 2021
COVID-19: a semantic-based pipeline for recommending biomedical entities
MA Barros, A Lamurias, D Sousa, P Ruas, FM Couto
Proceedings of the 1st Workshop on NLP for COVID-19 (Part 2) at EMNLP 2020, 2020
Named entity recognition and linking: A Portuguese and Spanish oncological parallel corpus
VDT Andrade, P Ruas, FM Couto
bioRxiv, 2021.09. 16.460605, 2021
COVID-19 recommender system based on an annotated multilingual corpus
M Barros, P Ruas, D Sousa, AH Bangash, FM Couto
Genomics & Informatics 19 (3), 2021
LASIGE and UNICAGE solution to the NASA LitCoin NLP Competition
P Ruas, DF Sousa, A Neves, C Cruz, FM Couto
arXiv preprint arXiv:2308.05609, 2023
Creating Recommender Systems Datasets in Scientific Fields
M Barros, FM Couto, M Pato, P Ruas
Proceedings of the 27th ACM SIGKDD Conference on Knowledge Discovery & Data …, 2021
Deep Semantic Entity Linking
P Ruas
Exploring biomedical ontologies, personalized pagerank and semantic similarity in the entity linking task
PS Ruas
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