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Rachel Shahan
Rachel Shahan
Verified email at ucla.edu
Title
Cited by
Cited by
Year
Genome-Scale Transcriptomic Insights into Early-Stage Fruit Development in Woodland Strawberry Fragaria vesca
C Kang, O Darwish, A Geretz, R Shahan, N Alkharouf, Z Liu
The Plant Cell 25 (6), 1960-1978, 2013
3002013
A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
R Shahan, CW Hsu, TM Nolan, BJ Cole, IW Taylor, L Greenstreet, ...
Developmental cell 57 (4), 543-560. e9, 2022
1472022
Re-annotation of the woodland strawberry (Fragaria vesca) genome
O Darwish, R Shahan, Z Liu, JP Slovin, NW Alkharouf
BMC genomics 16, 1-9, 2015
832015
Consensus coexpression network analysis identifies key regulators of flower and fruit development in wild strawberry
R Shahan, C Zawora, H Wight, J Sittmann, W Wang, SM Mount, Z Liu
Plant physiology 178 (1), 202-216, 2018
66*2018
Vision, challenges and opportunities for a Plant Cell Atlas
SG Jha, AT Borowsky, BJ Cole, N Fahlgren, A Farmer, SC Huang, P Karia, ...
Elife 10, e66877, 2021
422021
Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root
TM Nolan, N Vukašinović, CW Hsu, J Zhang, I Vanhoutte, R Shahan, ...
Science 379 (6639), eadf4721, 2023
332023
Single-cell analysis of cell identity in the Arabidopsis root apical meristem: insights and opportunities
R Shahan, TM Nolan, PN Benfey
Journal of Experimental Botany 72 (19), 6679-6686, 2021
262021
Identification of genes preferentially expressed in wild strawberry receptacle fruit and demonstration of their promoter activities
R Shahan, D Li, Z Liu
Horticulture Research 6, 2019
102019
A co-opted regulator of lateral root development controls nodule organogenesis in Lotus
R Shahan, PN Benfey
Developmental cell 52 (1), 6-7, 2020
52020
The future is now: gene expression dynamics at single cell resolution
R Shahan
The Plant Cell 31 (5), 933-934, 2019
52019
Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
C Grones, T Eekhout, D Shi, M Neumann, LS Berg, Y Ke, R Shahan, ...
The Plant Cell 36 (4), 812-828, 2024
42024
Resolving plant development in space and time with single-cell genomics
TM Nolan, R Shahan
Current opinion in plant biology, 102444, 2023
42023
Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT
CW Hsu, R Shahan, TM Nolan, PN Benfey, U Ohler
STAR protocols 3 (4), 101729, 2022
32022
The cold never bothered me anyway: DELLA-interacting growth regulating factors mediate plant growth in cold stress
R Shahan
The Plant Cell 32 (4), 797-798, 2020
32020
Pluripotency of a founding field: rebranding developmental biology
CD Rogers, C Amemiya, S Arur, L Babonis, M Barresi, M Bartlett, ...
Development 151 (3), 2024
2024
Editor profile: Siobhan M. Brady
R Shahan
The Plant Cell 33 (3), 441-444, 2021
2021
Tempting Fate: A Guanylate-Binding Protein Maintains Tomato Fruit Cell Differentiation
R Shahan
Plant Cell 32 (10), 3047-3048, 2020
2020
It’s All in the Neighborhood: SHORTROOT-Mediated Intercellular Signals Coordinate Phloem Development in the Root
R Shahan
The Plant Cell 32 (5), 1350-1351, 2020
2020
Father Knows Best? Small RNA Pathway Controls Endosperm Response to Paternal Genomic Dosage
R Shahan
The Plant Cell 31 (7), 1425-1426, 2019
2019
A Network Approach to Identify Key Regulators of Fruit Development in Fragaria vesca, a Diploid Strawberry
RM Shahan
University of Maryland, College Park, 2018
2018
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