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Jeongbin Park
Jeongbin Park
School of Biomedical Convergence Engineering, Pusan National University
Verified email at pusan.ac.kr - Homepage
Title
Cited by
Cited by
Year
Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases
S Bae, J Park, JS Kim
Bioinformatics 30 (10), 1473-1475, 2014
19732014
Digenome-seq: genome-wide profiling of CRISPR-Cas9 off-target effects in human cells
D Kim, S Bae, J Park, E Kim, S Kim, HR Yu, J Hwang, JI Kim, JS Kim
Nature Methods 12 (3), 237-243, 2015
11002015
Cas-Designer: a web-based tool for choice of CRISPR-Cas9 target sites
J Park, S Bae, JS Kim
Bioinformatics 31 (24), 4014-4016, 2015
4152015
Cas-analyzer: an online tool for assessing genome editing results using NGS data
J Park, K Lim, JS Kim, S Bae
Bioinformatics 33 (2), 286-288, 2017
3632017
Genome-wide target specificities of CRISPR-Cas9 nucleases revealed by multiplex Digenome-seq
D Kim, S Kim, S Kim, J Park, JS Kim
Genome Research 26 (3), 406-415, 2016
2332016
Screening drug effects in patient‐derived cancer cells links organoid responses to genome alterations
J Jabs, FM Zickgraf, J Park, S Wagner, X Jiang, K Jechow, K Kleinheinz, ...
Molecular Systems Biology 13, 955, 2017
2062017
Protein conformational dynamics dictate the binding affinity for a ligand
MH Seo, J Park, E Kim, S Hohng, HS Kim
Nature Communications 5, 3724, 2014
1682014
Web-based design and analysis tools for CRISPR base editing
GH Hwang, J Park, K Lim, S Kim, J Yu, E Yu, ST Kim, R Eils, JS Kim, ...
BMC Bioinformatics 19, 542, 2018
1622018
RAS-pathway mutation patterns define epigenetic subclasses in juvenile myelomonocytic leukemia
DB Lipka, T Witte, R Toth, J Yang, M Wiesenfarth, P Nöllke, A Fischer, ...
Nature Communications 8, 2126, 2017
1142017
Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics
TG Krieger, SM Tirier, J Park, K Jechow, T Eisemann, H Peterziel, P Angel, ...
Neuro-oncology 22 (8), 1138-1149, 2020
1002020
Cell segmentation-free inference of cell types from in situ transcriptomics data
J Park, W Choi, S Tiesmeyer, B Long, LE Borm, E Garren, TN Nguyen, ...
Nature Communications 12, 3545, 2021
94*2021
Methylation profiling identifies two subclasses of squamous cell carcinoma related to distinct cells of origin
M Rodríguez-Paredes, F Bormann, G Raddatz, J Gutekunst, ...
Nature Communications 9, 577, 2018
722018
IG-MYC+ neoplasms with precursor B-cell phenotype are molecularly distinct from Burkitt lymphomas
R Wagener, C López, K Kleinheinz, J Bausinger, SM Aukema, I Nagel, ...
Blood 132 (21), 2280-2285, 2018
632018
Response to ˇ°Unexpected mutations after CRISPR–Cas9 editing in vivoˇ±
ST Kim, J Park, D Kim, K Kim, S Bae, M Schlesner, JS Kim
Nature Methods 15 (4), 239-240, 2018
47*2018
Cas-Database: web-based genome-wide guide RNA library design for gene knockout screens using CRISPR-Cas9
J Park, JS Kim, S Bae
Bioinformatics 32 (13), 2017-2023, 2016
472016
CRISPR/Cas9-mediated gene knockout screens and target identification via whole-genome sequencing uncover host genes required for picornavirus infection
HS Kim, K Lee, S Bae, J Park, CK Lee, M Kim, E Kim, M Kim, S Kim, C Kim, ...
Journal of Biological Chemistry 292 (25), 10664-10671, 2017
452017
Digenome-seq web tool for profiling CRISPR specificity
J Park, L Childs, D Kim, GH Hwang, S Kim, ST Kim, JS Kim, S Bae
Nature Methods 14 (6), 548-549, 2017
452017
Cpf1-Database: web-based genome-wide guide RNA library design for gene knockout screens using CRISPR-Cpf1
J Park, S Bae
Bioinformatics 34 (6), 1077-1079, 2018
302018
pheno-seq–linking visual features and gene expression in 3D cell culture systems
SM Tirier, J Park, F Preu©¬er, L Amrhein, Z Gu, S Steiger, JP Mallm, ...
Scientific Reports 9, 12367, 2019
222019
SpaceTx: A Roadmap for Benchmarking Spatial Transcriptomics Exploration of the Brain
B Long, J Miller, TST Consortium
arXiv, 2301.08436, 2023
162023
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