| The human microbiome: a hot spot of microbial horizontal gene transfer L Liu, X Chen, G Skogerbø, P Zhang, R Chen, S He, DW Huang Genomics 100 (5), 265-270, 2012 | 143 | 2012 |
| BioCircos. js: an interactive Circos JavaScript library for biological data visualization on web applications Y Cui, X Chen, H Luo, Z Fan, J Luo, S He, H Yue, P Zhang, R Chen Bioinformatics 32 (11), 1740-1742, 2016 | 127 | 2016 |
| De novo prediction of RNA–protein interactions from sequence information Y Wang, X Chen, ZP Liu, Q Huang, Y Wang, D Xu, XS Zhang, R Chen, ... Molecular BioSystems 9 (1), 133-142, 2013 | 115 | 2013 |
| SpatialDB: a database for spatially resolved transcriptomes Z Fan, R Chen, X Chen Nucleic acids research 48 (D1), D233-D237, 2020 | 74 | 2020 |
| The novel long non-coding RNA CRG regulates Drosophila locomotor behavior M Li, S Wen, X Guo, B Bai, Z Gong, X Liu, Y Wang, Y Zhou, X Chen, L Liu, ... Nucleic acids research 40 (22), 11714-11727, 2012 | 71 | 2012 |
| Transcriptional profiling analysis and functional prediction of long noncoding RNAs in cancer J Yuan, H Yue, M Zhang, J Luo, L Liu, W Wu, T Xiao, X Chen, X Chen, ... Oncotarget 7 (7), 8131, 2016 | 57 | 2016 |
| Transcriptome-wide analysis of TDP-43 binding small RNAs identifies miR-NID1 (miR-8485), a novel miRNA that represses NRXN1 expression Z Fan, X Chen, R Chen Genomics 103 (1), 76-82, 2014 | 51 | 2014 |
| TDP-43 regulates cancer-associated microRNAs X Chen, Z Fan, W McGee, M Chen, R Kong, P Wen, T Xiao, X Chen, J Liu, ... Protein & Cell 9 (10), 848-866, 2018 | 38 | 2018 |
| LncVar: a database of genetic variation associated with long non-coding genes X Chen, Y Hao, Y Cui, Z Fan, S He, J Luo, R Chen Bioinformatics 33 (1), 112-118, 2017 | 34 | 2017 |
| LncRNA-encoded microproteins: A new form of cargo in cell culture-derived and circulating extracellular vesicles YF Cai T, Zhang Q, Wu B, Wang J, Li N, Zhang T, Wang Z, Luo J, Guo X, Ding X ... J Extracell Vesicles, 2021 | 31 | 2021 |
| LncRNA16 is a potential biomarker for diagnosis of early-stage lung cancer that promotes cell proliferation by regulating the cell cycle H Zhu, L Zhang, S Yan, W Li, J Cui, M Zhu, N Xia, Y Yang, J Yuan, X Chen, ... Oncotarget 8 (5), 7867, 2017 | 29 | 2017 |
| Association of the Polymorphism rs13259960 in SLEAR With Predisposition to Systemic Lupus Erythematosus Z Fan, X Chen, L Liu, C Zhu, J Xu, X Yin, Y Sheng, Z Zhu, L Wen, X Zuo, ... Arthritis & Rheumatology 72 (6), 985-996, 2020 | 27 | 2020 |
| Predicting housekeeping genes based on Fourier analysis B Dong, P Zhang, X Chen, L Liu, Y Wang, S He, R Chen Plos one 6 (6), e21012, 2011 | 20 | 2011 |
| Deep profiling of the novel intermediate-size noncoding RNAs in intraerythrocytic Plasmodium falciparum C Wei, T Xiao, P Zhang, Z Wang, X Chen, L Zhang, M Yao, R Chen, ... PLoS One 9 (4), e92946, 2014 | 19 | 2014 |
| Computational methods to predict long noncoding RNA functions based on co-expression network Y Zhao, H Luo, X Chen, Y Xiao, R Chen RNA Mapping: Methods and Protocols, 209-218, 2014 | 17 | 2014 |
| A differential sequencing-based analysis of the C. elegans noncoding transcriptome T Xiao, Y Wang, H Luo, L Liu, G Wei, X Chen, Y Sun, X Chen, G Skogerbø, ... Rna 18 (4), 626-639, 2012 | 12 | 2012 |
| Large-scale study of long non-coding RNA functions based on structure and expression features Y Zhao, J Wang, XW Chen, HT Luo, YJ Zhao, Y Xiao, RS Chen Science China Life sciences 56, 953-959, 2013 | 10 | 2013 |
| Deciphering early human pancreas development at the single-cell level Z Ma, X Zhang, W Zhong, H Yi, X Chen, Y Zhao, Y Ma, E Song, T Xu Nature Communications 14 (1), 5354, 2023 | 9 | 2023 |
| Human ESC‐derived immunity‐and matrix‐regulatory cells ameliorated white matter damage and vascular cognitive impairment in rats subjected to chronic cerebral hypoperfusion Y Zhao, J Wu, D Li, J Liu, W Chen, Z Hou, K Liu, L Jiang, X Chen, L Wang, ... Cell proliferation 55 (5), e13223, 2022 | 4 | 2022 |
| LncVar: deciphering genetic variations associated with long noncoding genes X Chen, Y Hao, Y Cui, Z Fan, R Chen Epitranscriptomics: Methods and Protocols, 189-198, 2019 | 3 | 2019 |
