Improved drug response prediction by drug target data integration via network-based profiling M Pak, S Lee, I Sung, B Koo, S Kim Briefings in Bioinformatics 24 (2), bbad034, 2023 | 11 | 2023 |
Metheor: Ultrafast DNA methylation heterogeneity calculation from bisulfite read alignments D Lee, B Koo, J Yang, S Kim PLOS Computational Biology 19 (3), e1010946, 2023 | 9 | 2023 |
GOAT: Gene-level biomarker discovery from multi-Omics data using graph ATtention neural network for eosinophilic asthma subtype D Jeong, B Koo, M Oh, TB Kim, S Kim Bioinformatics 39 (10), btad582, 2023 | 6 | 2023 |
Prediction of tumor purity from gene expression data using machine learning B Koo, JK Rhee Briefings in Bioinformatics 22 (6), bbab163, 2021 | 6 | 2021 |
A survey on computational methods for investigation on ncRNA-disease association through the mode of action perspective D Bang, J Gu, J Park, D Jeong, B Koo, J Yi, J Shin, I Jung, S Kim, S Lee International Journal of Molecular Sciences 23 (19), 11498, 2022 | 4 | 2022 |
Transfer learning of condition-specific perturbation in gene interactions improves drug response prediction D Bang, B Koo, S Kim Bioinformatics 40 (Supplement_1), i130-i139, 2024 | 1 | 2024 |
AMLs harboring DNMT3A-destabilizing variants show increased intratumor DNA methylation heterogeneity at bivalent chromatin domains D Lee, B Koo, SH Kim, J Byun, J Hong, DY Shin, CH Sun, JJ Song, J Kim, ... bioRxiv, 2023.02. 13.528223, 2023 | 1 | 2023 |
PONYTA: prioritization of phenotype-related genes from mouse KO events using PU learning on a biological network JH Kim, B Koo, S Kim Bioinformatics 40 (11), btae634, 2024 | | 2024 |
Unraveling the impact of lysosomal dysfunction on myeloproliferative neoplasm H Yoon, D Lee, S Song, B Koo, J Park, TK Kim, S Kim, S Kim, J Hong, ... Cancer Medicine 13 (18), e70238, 2024 | | 2024 |
Web-based Exploratory Data Mining System for Analyzing the Gene-level Relationship between Intratumoral Heterogeneity of Promoter DNA Methylation and Drug Response TH Kweon, B Koo, S Park, T Southiratn, S Kim 한국정보과학회 학술발표논문집, 363-365, 2024 | | 2024 |
Deep learning-based survival prediction using DNA methylation-derived 3D genomic information J Yang, D Lee, B Koo, D Jeong, S Kim Proceedings of the 14th ACM International Conference on Bioinformatics …, 2023 | | 2023 |
Lysosome Dysfunction Contributes to Myeloproliferative Neoplasm Development Via Oncostatin-M Dependent Inflammation H Yoon, S Song, D Lee, B Koo, J Park, TK Kim, S Kim, Y Koh, SS Yoon Blood 140 (Supplement 1), 12183-12184, 2022 | | 2022 |
Risk Stratification for Breast Cancer Patient by Simultaneous Learning of Molecular Subtype and Survival Outcome Using Genetic Algorithm-Based Gene Set Selection B Koo, D Lee, S Lee, I Sung, S Kim, S Lee Cancers 14 (17), 4120, 2022 | | 2022 |