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Mary Jo Ondrechen
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Thermodynamics for processes in finite time
B Andresen, RS Berry, MJ Ondrechen, P Salamon
Accounts of Chemical Research 17 (8), 266-271, 1984
3631984
THEMATICS: a simple computational predictor of enzyme function from structure
MJ Ondrechen, JG Clifton, D Ringe
Proceedings of the National Academy of Sciences 98 (22), 12473-12478, 2001
2842001
Model calculations of potential surfaces of van der Waals complexes containing large aromatic molecules
MJ Ondrechen, Z Berkovitch-Yellin, J Jortner
Journal of the American Chemical Society 103 (22), 6586-6592, 1981
2301981
The generalized Carnot cycle: A working fluid operating in finite time between finite heat sources and sinks
MJ Ondrechen, MH Rubin, YB Band
The Journal of Chemical Physics 78 (7), 4721-4727, 1983
1441983
Maximum work from a finite reservoir by sequential Carnot cycles
MJ Ondrechen, B Anderson, M Mozurkewich, RS Berry
American Association of Physics Teachers, 1981
1441981
Energetics and dynamics of large Van der Waals molecules
U Even, A Amirav, S Leutwyler, MJ Ondrechen, Z Berkovitch-Yellin, ...
Faraday Discussions of the Chemical Society 73, 153-172, 1982
1421982
Electronic structure of the Creutz-Taube ion
LT Zhang, J Ko, MJ Ondrechen
Journal of the American Chemical Society 109 (6), 1666-1671, 1987
1291987
A model for the optical absorption spectrum of (. mu.-pyrazine) decaamminediruthenium (5+): What hath Creutz and Taube wrought?
MJ Ondrechen, J Ko, LT Zhang
Journal of the American Chemical Society 109 (6), 1672-1676, 1987
1131987
Biochemical functional predictions for protein structures of unknown or uncertain function
CL Mills, PJ Beuning, MJ Ondrechen
Computational and structural biotechnology journal 13, 182-191, 2015
1052015
Partial order optimum likelihood (POOL): maximum likelihood prediction of protein active site residues using 3D Structure and sequence properties
W Tong, Y Wei, LF Murga, MJ Ondrechen, RJ Williams
PLoS computational biology 5 (1), e1000266, 2009
872009
Identification of functional subclasses in the DJ-1 superfamily proteins
Y Wei, D Ringe, MA Wilson, MJ Ondrechen
PLoS computational biology 3 (1), e15, 2007
842007
Statistical criteria for the identification of protein active sites using theoretical microscopic titration curves
J Ko, LF Murga, P André, H Yang, MJ Ondrechen, RJ Williams, ...
Proteins: Structure, Function, and Bioinformatics 59 (2), 183-195, 2005
782005
Selective prediction of interaction sites in protein structures with THEMATICS
Y Wei, J Ko, LF Murga, MJ Ondrechen
Bmc Bioinformatics 8, 1-15, 2007
732007
Role of vibronic coupling and correlation effects on the optical properties of mixed-valent and monovalent dimer compounds: the Creutz-Taube ion and its monovalent analogs
A Ferretti, A Lami, MJ Ondrechen, G Villani
The Journal of Physical Chemistry 99 (26), 10484-10491, 1995
671995
Line shape of the intervalence transfer band in bridged mixed-valence dimers: the delocalized case
J Ko, MJ Ondrechen
Journal of the American Chemical Society 107 (22), 6161-6167, 1985
631985
Pharmacological validation of Trypanosoma brucei phosphodiesterases B1 and B2 as druggable targets for African sleeping sickness
ND Bland, C Wang, C Tallman, AE Gustafson, Z Wang, TD Ashton, ...
Journal of medicinal chemistry 54 (23), 8188-8194, 2011
622011
Adiabatic potentials for a bridged three-site electron-transfer system
LJ Root, MJ Ondrechen
Chemical Physics Letters 93 (5), 421-424, 1982
591982
High‐performance prediction of functional residues in proteins with machine learning and computed input features
S Somarowthu, H Yang, DGC Hildebrand, MJ Ondrechen
Biopolymers 95 (6), 390-400, 2011
582011
Two-dimensional potential surfaces for bridged mixed-valence dimers
MJ Ondrechen, J Ko, LJ Root
The Journal of Physical Chemistry 88 (24), 5919-5923, 1984
551984
Evidence of the Participation of Remote Residues in the Catalytic Activity of Co-Type Nitrile Hydratase from Pseudomonas putida
HR Brodkin, WRP Novak, AC Milne, JA D’Aquino, NM Karabacak, ...
Biochemistry 50 (22), 4923-4935, 2011
542011
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