Mary Jo Ondrechen
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Thermodynamics for processes in finite time
B Andresen, RS Berry, MJ Ondrechen, P Salamon
Accounts of Chemical Research 17 (8), 266-271, 1984
THEMATICS: a simple computational predictor of enzyme function from structure
MJ Ondrechen, JG Clifton, D Ringe
Proceedings of the National Academy of Sciences 98 (22), 12473-12478, 2001
Model calculations of potential surfaces of van der Waals complexes containing large aromatic molecules
MJ Ondrechen, Z Berkovitch-Yellin, J Jortner
Journal of the American Chemical Society 103 (22), 6586-6592, 1981
Faraday Discuss. Chem
EU Even, A Amirav, S Leutwyler, MJ Ondrechen, Z Berkovitch-Yelin, ...
Sac 73, 153, 1982
The generalized Carnot cycle: A working fluid operating in finite time between finite heat sources and sinks
MJ Ondrechen, MH Rubin, YB Band
The Journal of Chemical Physics 78 (7), 4721-4727, 1983
Maximum work from a finite reservoir by sequential Carnot cycles
MJ Ondrechen, B Andresen, M Mozurkewich, RS Berry
American Journal of Physics 49 (7), 681-685, 1981
Electronic structure of the Creutz-Taube ion
LT Zhang, J Ko, MJ Ondrechen
Journal of the American Chemical Society 109 (6), 1666-1671, 1987
A model for the optical absorption spectrum of (. mu.-pyrazine) decaamminediruthenium (5+): What hath Creutz and Taube wrought?
MJ Ondrechen, J Ko, LT Zhang
Journal of the American Chemical Society 109 (6), 1672-1676, 1987
Identification of functional subclasses in the DJ-1 superfamily proteins
Y Wei, D Ringe, MA Wilson, MJ Ondrechen
PLoS Comput Biol 3 (1), e15, 2007
Biochemical functional predictions for protein structures of unknown or uncertain function
CL Mills, PJ Beuning, MJ Ondrechen
Computational and Structural Biotechnology Journal 13, 182-191, 2015
Statistical criteria for the identification of protein active sites using theoretical microscopic titration curves
J Ko, LF Murga, P André, H Yang, MJ Ondrechen, RJ Williams, ...
Proteins: Structure, Function, and Bioinformatics 59 (2), 183-195, 2005
Partial order optimum likelihood (POOL): maximum likelihood prediction of protein active site residues using 3D Structure and sequence properties
W Tong, Y Wei, LF Murga, MJ Ondrechen, RJ Williams
PLoS Comput Biol 5 (1), e1000266, 2009
Role of vibronic coupling and correlation effects on the optical properties of mixed-valent and monovalent dimer compounds: the Creutz-Taube ion and its monovalent analogs
A Ferretti, A Lami, MJ Ondrechen, G Villani
The Journal of Physical Chemistry 99 (26), 10484-10491, 1995
Selective prediction of interaction sites in protein structures with THEMATICS
Y Wei, J Ko, LF Murga, MJ Ondrechen
BMC bioinformatics 8 (1), 119, 2007
Line shape of the intervalence transfer band in bridged mixed-valence dimers: the delocalized case
J Ko, MJ Ondrechen
Journal of the American Chemical Society 107 (22), 6161-6167, 1985
Adiabatic potentials for a bridged three-site electron-transfer system
LJ Root, MJ Ondrechen
Chemical Physics Letters 93 (5), 421-424, 1982
Pharmacological validation of Trypanosoma brucei phosphodiesterases B1 and B2 as druggable targets for African sleeping sickness
ND Bland, C Wang, C Tallman, AE Gustafson, Z Wang, TD Ashton, ...
Journal of medicinal chemistry 54 (23), 8188-8194, 2011
The human Aurora kinase inhibitor danusertib is a lead compound for anti-trypanosomal drug discovery via target repurposing
SO Ochiana, V Pandarinath, Z Wang, R Kapoor, MJ Ondrechen, L Ruben, ...
European journal of medicinal chemistry 62, 777-784, 2013
pH-dependent interdomain tethers of CD1b regulate its antigen capture
M Relloso, TY Cheng, JS Im, E Parisini, C Roura-Mir, C DeBono, ...
Immunity 28 (6), 774-786, 2008
Thermodynamics in finite time: A chemically driven engine
MJ Ondrechen, RS Berry, B Andresen
The Journal of Chemical Physics 72 (9), 5118-5124, 1980
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