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Rui Chen
Rui Chen
vanderbilt.edu의 이메일 확인됨
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A Bayesian framework that integrates multi-omics data and gene networks predicts risk genes from schizophrenia GWAS data
Q Wang, R Chen, F Cheng, Q Wei, Y Ji, H Yang, X Zhong, R Tao, Z Wen, ...
Nature neuroscience 22 (5), 691-699, 2019
1312019
A big-data approach to understanding metabolic rate and response to obesity in laboratory mice
JK Corrigan, D Ramachandran, Y He, CJ Palmer, MJ Jurczak, R Chen, ...
Elife 9, e53560, 2020
692020
Subtype-GAN: a deep learning approach for integrative cancer subtyping of multi-omics data
H Yang, R Chen, D Li, Z Wang
Bioinformatics 37 (16), 2231-2237, 2021
592021
Leveraging blood serotonin as an endophenotype to identify de novo and rare variants involved in autism
R Chen, LK Davis, S Guter, Q Wei, S Jacob, MH Potter, NJ Cox, EH Cook, ...
Molecular autism 8, 1-12, 2017
552017
Transcription factor OsTGA10 is a target of the MADS protein OsMADS8 and is required for tapetum development
ZS Chen, XF Liu, DH Wang, R Chen, XL Zhang, ZH Xu, SN Bai
Plant Physiology 176 (1), 819-835, 2018
402018
Phenome-based approach identifies RIC1-linked Mendelian syndrome through zebrafish models, biobank associations and clinical studies
G Unlu, X Qi, ER Gamazon, DB Melville, N Patel, AR Rushing, M Hashem, ...
Nature medicine 26 (1), 98-109, 2020
372020
A gene expression profiling of early rice stamen development that reveals inhibition of photosynthetic genes by OsMADS58
R Chen, LP Shen, DH Wang, FG Wang, HY Zeng, ZS Chen, YB Peng, ...
Molecular plant 8 (7), 1069-1089, 2015
302015
A haplotype-based framework for group-wise transmission/disequilibrium tests for rare variant association analysis
R Chen, Q Wei, X Zhan, X Zhong, JS Sutcliffe, NJ Cox, EH Cook, C Li, ...
Bioinformatics 31 (9), 1452-1459, 2015
202015
De novo pattern discovery enables robust assessment of functional consequences of non-coding variants
BL Hai Yang, Rui Chen, Quan Wang, Qiang Wei, Ying Ji, Guangze Zheng, Xue ...
Bioinformatics, 2018
19*2018
The impact of genotype calling errors on family-based studies
Q Yan, R Chen, JS Sutcliffe, EH Cook, DE Weeks, B Li, W Chen
Scientific Reports 6 (1), 28323, 2016
182016
DRAMS: A tool to detect and re-align mixed-up samples for integrative studies of multi-omics data
Y Jiang, G Giase, K Grennan, AW Shieh, Y Xia, L Han, Q Wang, Q Wei, ...
PLoS computational biology 16 (4), e1007522, 2020
72020
From multi-omics data to the cancer druggable gene discovery: a novel machine learning-based approach
H Yang, L Gan, R Chen, D Li, J Zhang, Z Wang
Briefings in Bioinformatics 24 (1), bbac528, 2023
52023
TVAR: assessing tissue-specific functional effects of non-coding variants with deep learning
H Yang, R Chen, Q Wang, Q Wei, Y Ji, X Zhong, B Li
Bioinformatics 38 (20), 4697-4704, 2022
32022
Adjustment method for microarray data generated using two-cycle RNA labeling protocol
F Wang, R Chen, D Ji, S Bai, M Qian, M Deng
BMC genomics 14, 1-11, 2013
32013
OsMADS58 stabilizes gene regulatory circuits during rice stamen development
L Shen, F Tian, Z Cheng, Q Zhao, Q Feng, Y Zhao, B Han, Y Fang, Y Lin, ...
Plants 11 (21), 2899, 2022
12022
Integration of multidimensional splicing data and GWAS summary statistics for risk gene discovery
Y Ji, Q Wei, R Chen, Q Wang, R Tao, B Li
PLoS Genetics 18 (6), e1009814, 2022
12022
Molecular signature incorporating the immune microenvironment enhances thyroid cancer outcome prediction
GJ Xu, MA Loberg, JN Gallant, Q Sheng, SC Chen, BD Lehmann, ...
Cell Genomics 3 (10), 2023
2023
The impact of common variants on gene expression in the human brain: from RNA to protein to schizophrenia risk
Q Liang, Y Jiang, AW Shieh, D Zhou, R Chen, F Wang, M Xu, M Niu, ...
bioRxiv, 2023
2023
A Bayesian framework to integrate multi-level genome-scale data for Autism risk gene prioritization
Y Ji, R Chen, Q Wang, Q Wei, R Tao, B Li
BMC bioinformatics 23 (1), 146, 2022
2022
Leveraging Gene-Level Prediction as Informative Covariate in Hypothesis Weighting Improves Power for Rare Variant Association Studies
Y Ji, R Chen, Q Wang, Q Wei, R Tao, B Li
Genes 13 (2), 381, 2022
2022
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학술자료 1–20