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Fatima Zare
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Year
An evaluation of copy number variation detection tools for cancer using whole exome sequencing data
F Zare, M Dow, N Monteleone, A Hosny, S Nabavi
BMC Bioinformatics Journal, 2017
1712017
Noise cancellation using total variation for copy number variation detection
F Zare, A Hosny, S Nabavi
BMC bioinformatics 19, 1-12, 2018
62018
Preprocessing sequence coverage data for more precise detection of copy number variations
F Zare, S Ansari, K Najarian, S Nabavi
IEEE/ACM transactions on computational biology and bioinformatics 17 (3 …, 2018
62018
Estimation of convolutional interleaver parameters in the burst and BSC channels
A Jamshidi, A Keshavarz-Hadad, F Zare
Iranian Journal of Science and Technology, Transactions of Electrical …, 2016
62016
Noise cancellation for robust copy number variation detection using next generation sequencing data
F Zare, S Ansari, K Najarian, S Nabavi
Bioinformatics and Biomedicine (BIBM), 2017 IEEE International Conference …, 2017
52017
Identification of copy number alterations from next-generation sequencing data
S Nabavi, F Zare
Computational Methods for Precision Oncology, 55-74, 2022
32022
Copy number variation detection using partial alignment information
F Zare, S Ansari, K Najarian, S Nabavi
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018
32018
Copy Number Variation Detection Using Total Variation
F Zare, S Nabavi
Proceedings of the 10th ACM International Conference on Bioinformatics …, 2019
22019
Lowering Error Floors by Concatenation of Low-Density Parity-Check (LDPC) and Array Code
C Soltanpur, M Ghamari, BM Heravi, F Zare
International Journal of Mathematical, Computational, Physical, Electrical …, 2017
2*2017
Integrative deep learning for PanCancer molecular subtype classification using histopathological images and RNAseq data
F Zare, J Noorbakhsh, T Wang, JH Chuang, S Nabavi
Proceedings of the 11th ACM International Conference on Bioinformatics …, 2020
12020
Copy number variation detection using single cell sequencing data
F Zare, J Stark, S Nabavi
Proceedings of the 12th ACM Conference on Bioinformatics, Computational …, 2021
2021
Developing Novel Copy Number Variation Detection Methods using Emerging Sequencing Data
F Zare
University of Connecticut, 2020
2020
Developing Novel Copy Number Variation Detection Methods using Emerging Sequencing Data
F Zare
http://hdl.handle.net/11134/20002:860668657, 2020
2020
Varsimlab: A Docker-based Pipeline to Automatically Synthesize Short Reads with Genomic Aberrations
A Hosny, F Zare, S Nabavi
Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017
2017
Bias and Noise Cancellation for Robust Copy Number Variation Detection
F Zare, S Ansari, K Najarian, S Nabavi
Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017
2017
Evaluation of Copy Number Variation Detection Tools in Cancer Using Exome Sequencing Data
F Zare, M Dow, S Nabavi
38th Annual International Conference of the IEEE Engineering in Medicine and …, 2016
2016
A Blind Estimation of Interleaver Length in Noisy Channels
F Zare, A Jamshidi, A Keshavarz-Hadad
Proceeding of the passive surveillance systems conference, 2014
2014
Developing Novel Copy Number Variation Detection Methods using Emerging Sequencing Data
F Zare
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Articles 1–18