Gene circuit performance characterization and resource usage in a cell-free “Breadboard” D Siegal-Gaskins, ZA Tuza, J Kim, V Noireaux, RM Murray ACS synthetic biology 3 (6), 416-425, 2014 | 211 | 2014 |
Tools for engineering coordinated system behaviour in synthetic microbial consortia N Kylilis, ZA Tuza, GB Stan, KM Polizzi Nature communications 9 (1), 2677, 2018 | 139 | 2018 |
An In Silico Modeling Toolbox for Rapid Prototyping of Circuits in a Biomolecular “Breadboard” System ZA Tuza, V Singhal, J Kim, RM Murray CDC 2013, 2013 | 32 | 2013 |
BioCRNpyler: compiling chemical reaction networks from biomolecular parts in diverse contexts W Poole, A Pandey, A Shur, ZA Tuza, RM Murray PLoS computational biology 18 (4), e1009987, 2022 | 29 | 2022 |
Computing all possible graph structures describing linearly conjugate realizations of kinetic systems B Ács, G Szederkényi, Z Tuza, ZA Tuza Computer Physics Communications 204, 11-20, 2016 | 24 | 2016 |
Using LMS-100 laser rangefinder for indoor metric map building J Rudan, Z Tuza, G Szederkényi 2010 IEEE International Symposium on Industrial Electronics, 525-530, 2010 | 19 | 2010 |
Signal differentiation with genetic networks W Halter, ZA Tuza, F Allgöwer IFAC-PapersOnLine 50 (1), 10938-10943, 2017 | 16 | 2017 |
Computing Linearly Conjugate Weakly Reversible Kinetic Structures Using Optimization and Graph Theory B Ács, G Szederkényi, ZA Tuza, Z Tuza MATCH Communications in Mathematical and in Computer Chemistry 74 (3), 489-512, 2015 | 14 | 2015 |
A MATLAB toolbox for modeling genetic circuits in cell-free systems V Singhal, ZA Tuza, ZZ Sun, RM Murray Synthetic Biology 6 (1), ysab007, 2021 | 9 | 2021 |
Computing all sparse kinetic structures for a Lorenz system using optimization ZA Tuza, G Szederkényi, KM Hangos, AA Alonso, JR Banga International Journal of Bifurcation and Chaos 23 (08), 1350141, 2013 | 8 | 2013 |
Developing an integrated software environment for mobile robot navigation and control Z Tuza, J Rudan, G Szederkényi 2010 International Conference on Indoor Positioning and Indoor Navigation, 1-6, 2010 | 8 | 2010 |
Gene Circuit Performance Characterization and Resource Usage in a Cell-Free “Breadboard.” ACS Synth. Biol. 3, 416–425 D Siegal-Gaskins, ZA Tuza, J Kim, V Noireaux, RM Murray | 7 | 2014 |
Resource-aware whole-cell model of division of labour in a microbial consortium for complex-substrate degradation E Atkinson, Z Tuza, G Perrino, GB Stan, R Ledesma-Amaro Microbial Cell Factories 21 (1), 115, 2022 | 6 | 2022 |
Resource-aware whole-cell model of division of labour in a microbial consortium for complex-substrate degradation E Atkinson, Z Tuza, G Perrino, GB Stan, R Ledesma-Amaro Microbial Cell Factories 21 (1), 115, 2022 | 6 | 2022 |
A resource dependent protein synthesis model for evaluating synthetic circuits W Halter, JM Montenbruck, ZA Tuza, F Allgöwer Journal of Theoretical Biology 420, 267-278, 2017 | 6 | 2017 |
An automatic sparse model estimation method guided by constraints that encode system properties ZA Tuza, GB Stan 2019 18th European Control Conference (ECC), 2171-2176, 2019 | 4 | 2019 |
Characterization of Biologically Relevant Network Structures form Time-series Data ZA Tuza, GB Stan 2018 IEEE Conference on Decision and Control (CDC), 1089-1095, 2018 | 4 | 2018 |
Efficient Computation of All Distinct Realization Structures of Kinetic Systems ZA Tuza, B Ács, G Szederkényi, F Allgöwer IFAC-PapersOnLine 49 (26), 194-200, 2016 | 4 | 2016 |
Computing core reactions of uncertain polynomial kinetic systems ZA Tuza, G Szederkényi 2015 23rd Mediterranean Conference on Control and Automation (MED), 1140-1147, 2015 | 4 | 2015 |
A linear programming-based strategy to save pipette tips in automated DNA assembly K Sechkar, ZA Tuza, GB Stan Synthetic Biology 7 (1), ysac004, 2022 | 3 | 2022 |