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Paul Stodghill
Paul Stodghill
Agricultural Research Service, USDA
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Automated application-level checkpointing of MPI programs
G Bronevetsky, D Marques, K Pingali, P Stodghill
Proceedings of the ninth ACM SIGPLAN symposium on Principles and practice of …, 2003
2942003
A comparison of empirical and model-driven optimization
K Yotov, X Li, G Ren, M Cibulskis, G DeJong, M Garzaran, D Padua, ...
Proceedings of the ACM SIGPLAN 2003 conference on Programming language …, 2003
2212003
Is search really necessary to generate high-performance BLAS?
K Yotov, X Li, G Ren, MJS Garzaran, D Padua, K Pingali, P Stodghill
Proceedings of the IEEE 93 (2), 358-386, 2005
1842005
Transcriptome Analysis of Pseudomonas syringae Identifies New Genes, Noncoding RNAs, and Antisense Activity
MJ Filiatrault, PV Stodghill, PA Bronstein, S Moll, M Lindeberg, G Grills, ...
Journal of bacteriology 192 (9), 2359-2372, 2010
1612010
Dependence flow graphs: An algebraic approach to program dependencies
K Pingali, M Beck, R Johnson, M Moudgill, P Stodghill
Proceedings of the 18th ACM SIGPLAN-SIGACT symposium on Principles of …, 1991
1391991
Solving alignment using elementary linear algebra
D Bau, I Kodukula, V Kotlyar, K Pingali, P Stodghill
Languages and Compilers for Parallel Computing: 7th International Workshop …, 1995
1141995
Implementation and evaluation of a scalable application-level checkpoint-recovery scheme for MPI programs
M Schulz, G Bronevetsky, R Fernandes, D Marques, K Pingali, P Stodghill
SC'04: Proceedings of the 2004 ACM/IEEE Conference on Supercomputing, 38-38, 2004
1132004
Pseudomonas syringae pv. tomato DC3000 type III secretion effector polymutants reveal an interplay between HopAD1 and AvrPtoB
HL Wei, S Chakravarthy, J Mathieu, TC Helmann, P Stodghill, B Swingle, ...
Cell host & microbe 17 (6), 752-762, 2015
1032015
A relational approach to the compilation of sparse matrix programs
V Kotlyar, K Pingali, P Stodghill
Euro-Par'97 Parallel Processing: Third International Euro-Par Conference …, 1997
891997
Automatic measurement of memory hierarchy parameters
K Yotov, K Pingali, P Stodghill
Proceedings of the 2005 ACM SIGMETRICS international conference on …, 2005
812005
Collective operations in application-level fault-tolerant MPI
G Bronevetsky, D Marques, K Pingali, P Stodghill
Proceedings of the 17th annual international conference on Supercomputing …, 2003
762003
Next-generation generic programming and its application to sparse matrix computations
N Mateev, K Pingali, P Stodghill, V Kotlyar
Proceedings of the 14th international conference on Supercomputing, 88-99, 2000
682000
C 3: A System for Automating Application-Level Checkpointing of MPI Programs
G Bronevetsky, D Marques, K Pingali, P Stodghill
Languages and Compilers for Parallel Computing: 16th International Workshop …, 2004
672004
Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000
BG Butcher, PA Bronstein, CR Myers, PV Stodghill, JJ Bolton, EJ Markel, ...
Journal of bacteriology 193 (18), 4598-4611, 2011
662011
Recent advances in checkpoint/recovery systems
G Bronevetsky, R Fernandes, D Marques, K Pingali, P Stodghill
Proceedings 20th IEEE International Parallel & Distributed Processing …, 2006
562006
Think globally, search locally
K Yotov, K Pingali, P Stodghill
Proceedings of the 19th annual international conference on Supercomputing …, 2005
532005
Construction of an rsmX co-variance model and identification of five rsmX non-coding RNAs in Pseudomonas syringae pv. tomato DC3000
S Moll, DJ Schneider, P Stodghill, CR Myers, SW Cartinhour, MJ Filiatrault
RNA biology 7 (5), 508-516, 2010
522010
AlgU controls expression of virulence genes in Pseudomonas syringae pv. tomato DC3000
E Markel, P Stodghill, Z Bao, CR Myers, B Swingle
Journal of Bacteriology 198 (17), 2330-2344, 2016
512016
Ca2+-Induced Two-Component System CvsSR Regulates the Type III Secretion System and the Extracytoplasmic Function Sigma Factor AlgU in Pseudomonas …
MR Fishman, J Zhang, PA Bronstein, P Stodghill, MJ Filiatrault
Journal of bacteriology 200 (5), 10.1128/jb. 00538-17, 2018
492018
Global Analysis of the HrpL Regulon in the Plant Pathogen Pseudomonas syringae pv. tomato DC3000 Reveals New Regulon Members with Diverse Functions
HN Lam, S Chakravarthy, HL Wei, HC BuiNguyen, PV Stodghill, ...
PLoS One 9 (8), e106115, 2014
492014
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