Purvesh Khatri
Title
Cited by
Cited by
Year
Ten years of pathway analysis: current approaches and outstanding challenges
P Khatri, M Sirota, AJ Butte
PLoS computational biology 8 (2), e1002375, 2012
13532012
A systems biology approach for pathway level analysis
S Draghici, P Khatri, AL Tarca, K Amin, A Done, C Voichita, C Georgescu, ...
Genome research 17 (10), 1537-1545, 2007
10612007
Ontological analysis of gene expression data: current tools, limitations, and open problems
P Khatri, S Drăghici
Bioinformatics 21 (18), 3587-3595, 2005
10352005
A novel signaling pathway impact analysis
AL Tarca, S Draghici, P Khatri, SS Hassan, P Mittal, J Kim, CJ Kim, ...
Bioinformatics 25 (1), 75-82, 2009
8992009
Reliability and reproducibility issues in DNA microarray measurements
S Draghici, P Khatri, AC Eklund, Z Szallasi
TRENDS in Genetics 22 (2), 101-109, 2006
7072006
Global functional profiling of gene expression
S Draghici, P Khatri, RP Martins, GC Ostermeier, SA Krawetz
Genomics 81 (2), 98-104, 2003
7002003
Spermatozoal RNA profiles of normal fertile men
GC Ostermeier, DJ Dix, D Miller, P Khatri, SA Krawetz
The Lancet 360 (9335), 772-777, 2002
5522002
Profiling gene expression using onto-express
P Khatri, S Draghici, GC Ostermeier, SA Krawetz
Genomics 79 (2), 266-270, 2002
5432002
Cell type–specific gene expression differences in complex tissues
SS Shen-Orr, R Tibshirani, P Khatri, DL Bodian, F Staedtler, NM Perry, ...
Nature methods 7 (4), 287-289, 2010
4522010
Onto-tools, the toolkit of the modern biologist: onto-express, onto-compare, onto-design and onto-translate
S Draghici, P Khatri, P Bhavsar, A Shah, SA Krawetz, MA Tainsky
Nucleic acids research 31 (13), 3775-3781, 2003
4352003
NetPath: a public resource of curated signal transduction pathways
K Kandasamy, SS Mohan, R Raju, S Keerthikumar, GSS Kumar, ...
Genome biology 11 (1), 1-9, 2010
4202010
Systems biological assessment of immunity to mild versus severe COVID-19 infection in humans
PS Arunachalam, F Wimmers, CKP Mok, RAPM Perera, M Scott, T Hagan, ...
Science 369 (6508), 1210-1220, 2020
3322020
SMYD3 links lysine methylation of MAP3K2 to Ras-driven cancer
PK Mazur, N Reynoird, P Khatri, PWTC Jansen, AW Wilkinson, S Liu, ...
Nature 510 (7504), 283-287, 2014
2932014
A drug repositioning approach identifies tricyclic antidepressants as inhibitors of small cell lung cancer and other neuroendocrine tumors
NS Jahchan, JT Dudley, PK Mazur, N Flores, D Yang, A Palmerton, ...
Cancer discovery 3 (12), 1364-1377, 2013
2852013
Combined inhibition of BET family proteins and histone deacetylases as a potential epigenetics-based therapy for pancreatic ductal adenocarcinoma
PK Mazur, A Herner, SS Mello, M Wirth, S Hausmann, FJ Sánchez-Rivera, ...
Nature medicine 21 (10), 1163-1171, 2015
2802015
Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis
TE Sweeney, L Braviak, CM Tato, P Khatri
The Lancet Respiratory Medicine 4 (3), 213-224, 2016
2422016
A comprehensive time-course–based multicohort analysis of sepsis and sterile inflammation reveals a robust diagnostic gene set
TE Sweeney, A Shidham, HR Wong, P Khatri
Science translational medicine 7 (287), 287ra71-287ra71, 2015
2252015
Robust classification of bacterial and viral infections via integrated host gene expression diagnostics
TE Sweeney, HR Wong, P Khatri
Science translational medicine 8 (346), 346ra91-346ra91, 2016
1962016
Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments
P Khatri, P Bhavsar, G Bawa, S Draghici
Nucleic acids research 32 (suppl_2), W449-W456, 2004
1902004
A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantation
P Khatri, S Roedder, N Kimura, K De Vusser, AA Morgan, Y Gong, ...
Journal of Experimental Medicine 210 (11), 2205-2221, 2013
1782013
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Articles 1–20