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Panuwat Trairatphisan
Panuwat Trairatphisan
Verified email at sanofi.com
Title
Cited by
Cited by
Year
Recent development and biomedical applications of probabilistic Boolean networks
P Trairatphisan, A Mizera, J Pang, AA Tantar, J Schneider, T Sauter
Cell communication and signaling 11, 1-25, 2013
1152013
From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL
A Liu, P Trairatphisan, E Gjerga, A Didangelos, J Barratt, ...
NPJ systems biology and applications 5 (1), 40, 2019
1072019
Dysregulated mesenchymal PDGFR‐β drives kidney fibrosis
EM Buhl, S Djudjaj, BM Klinkhammer, K Ermert, VG Puelles, ...
EMBO molecular medicine 12 (3), e11021, 2020
492020
L‐plastin Ser5 phosphorylation in breast cancer cells and in vitro is mediated by RSK downstream of the ERK/MAPK pathway
MJ Lommel, P Trairatphisan, K Gäbler, C Laurini, A Muller, T Kaoma, ...
The FASEB Journal 30 (3), 1218-1233, 2016
422016
optPBN: An optimisation toolbox for probabilistic Boolean networks
P Trairatphisan, A Mizera, J Pang, AA Tantar, T Sauter
PLoS One 9 (7), e98001, 2014
382014
Integration of temporal single cell cellular stress response activity with logic-ODE modeling reveals activation of ATF4-CHOP axis as a critical predictor of drug-induced liver …
LS Wijaya, P Trairatphisan, A Gabor, M Niemeijer, J Keet, AA Morera, ...
Biochemical Pharmacology 190, 114591, 2021
202021
Converting networks to predictive logic models from perturbation signalling data with CellNOpt
E Gjerga, P Trairatphisan, A Gabor, H Koch, C Chevalier, F Ceccarelli, ...
Bioinformatics 36 (16), 4523-4524, 2020
202020
A probabilistic boolean network approach for the analysis of cancer-specific signalling: A case study of deregulated PDGF signalling in GIST
P Trairatphisan, M Wiesinger, C Bahlawane, S Haan, T Sauter
PloS one 11 (5), e0156223, 2016
202016
The human hepatocyte TXG-MAPr: gene co-expression network modules to support mechanism-based risk assessment
G Callegaro, SJ Kunnen, P Trairatphisan, S Grosdidier, M Niemeijer, ...
Archives of Toxicology 95, 3745-3775, 2021
192021
Quantitative systems toxicology modeling to address key safety questions in drug development: a focus of the TransQST consortium
S Ferreira, C Fisher, LI Furlong, L Laplanche, BK Park, C Pin, ...
Chemical Research in Toxicology 33 (1), 7-9, 2020
172020
FALCON: a toolbox for the fast contextualization of logical networks
S De Landtsheer, P Trairatphisan, P Lucarelli, T Sauter
Bioinformatics 33 (21), 3431-3436, 2017
132017
eTRANSAFE: data science to empower translational safety assessment
F Sanz, F Pognan, T Steger-Hartmann, C Díaz, S Asakura, A Amberg, ...
Nature Reviews Drug Discovery 22 (8), 605-606, 2023
72023
Probabilistic model checking of the PDGF signaling pathway
Q Yuan, P Trairatphisan, J Pang, S Mauw, M Wiesinger, T Sauter
Transactions on Computational Systems Biology XIV: Special Issue on …, 2012
62012
Identifying multiscale translational safety biomarkers using a network-based systems approach
G Callegaro, JP Schimming, JP González, SJ Kunnen, L Wijaya, ...
Iscience 26 (3), 2023
52023
From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL. NPJ Syst Biol Appl 5
A Liu, P Trairatphisan, E Gjerga
52019
Literature and data-driven based inference of signalling interactions using time-course data
E Gjerga, P Trairatphisan, A Gabor, J Saez-Rodriguez
IFAC-PapersOnLine 52 (26), 52-57, 2019
32019
A study of the PDGF signaling pathway with PRISM
Q Yuan, J Pang, S Mauw, P Trairatphisan, M Wiesinger, T Sauter
arXiv preprint arXiv:1109.1367, 2011
32011
The human hepatocyte TXG-MAPr: WGCNA transcriptomic modules to support mechanism-based risk assessment
G Callegaro, SJ Kunnen, P Trairatphisan, S Grosdidier, M Niemeijer, ...
BioRxiv, 2021.05. 17.444463, 2021
22021
Contextualization of causal regulatory networks from toxicogenomics data applied to drug-induced liver injury
P Trairatphisan, TM de Souza, J Kleinjans, D Jennen, J Saez-Rodriguez
Toxicology Letters 350, 40-51, 2021
12021
A balancing act: Parameter estimation for biological models with steady-state measurements
A Mizera, J Pang, T Sauter, P Trairatphisan
Proc. 11th Conference on Computational Methods in Systems Biology, ser. LNBI …, 2013
12013
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