Plant host-associated mechanisms for microbial selection P Jones, BJ Garcia, A Furches, GA Tuskan, D Jacobson Frontiers in Plant Science 10, 452782, 2019 | 171 | 2019 |
Transcript, protein and metabolite temporal dynamics in the CAM plant Agave PE Abraham, H Yin, AM Borland, D Weighill, SD Lim, HC De Paoli, ... Nature Plants 2 (12), 1-10, 2016 | 148 | 2016 |
Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models MR Garvin, E T. Prates, M Pavicic, P Jones, BK Amos, A Geiger, MB Shah, ... Genome biology 21, 1-26, 2020 | 63 | 2020 |
Fungal-bacterial networks in the Populus rhizobiome are impacted by soil properties and host genotype G Bonito, GMN Benucci, K Hameed, D Weighill, P Jones, KH Chen, ... Frontiers in Microbiology 10, 434794, 2019 | 49 | 2019 |
Genus-wide assessment of lignocellulose utilization in the extremely thermophilic genus Caldicellulosiruptor by genomic, pangenomic, and metagenomic analyses LL Lee, SE Blumer-Schuette, JA Izquierdo, JV Zurawski, AJ Loder, ... Applied and environmental microbiology 84 (9), e02694-17, 2018 | 45 | 2018 |
Defining the genetic components of callus formation: A GWAS approach GA Tuskan, R Mewalal, LE Gunter, KJ Palla, K Carter, DA Jacobson, ... PLoS One 13 (8), e0202519, 2018 | 39 | 2018 |
High throughput screening technologies in biomass characterization SR Decker, AE Harman-Ware, RM Happs, EJ Wolfrum, GA Tuskan, ... Frontiers in Energy Research 6, 120, 2018 | 32 | 2018 |
Genome-Wide Association Study of Wood Anatomical and Morphological Traits in Populus trichocarpa HB Chhetri, A Furches, D Macaya-Sanz, AR Walker, D Kainer, P Jones, ... Frontiers in plant science 11, 545748, 2020 | 28 | 2020 |
Neurotransmitter networks in mouse prefrontal cortex are reconfigured by isoflurane anesthesia X Zhang, AG Baer, JM Price, PC Jones, BJ Garcia, J Romero, AM Cliff, ... Journal of neurophysiology 123 (6), 2285-2296, 2020 | 26 | 2020 |
Pleiotropic and epistatic network-based discovery: integrated networks for target gene discovery D Weighill, P Jones, M Shah, P Ranjan, W Muchero, J Schmutz, ... Frontiers in Energy Research 6, 30, 2018 | 26 | 2018 |
Phytobiome and Transcriptional Adaptation of Populus deltoides to Acute Progressive Drought and Cyclic Drought BJ Garcia, JL Labbé, P Jones, PE Abraham, I Hodge, S Climer, S Jawdy, ... Phytobiomes journal 2 (4), 249-260, 2018 | 26 | 2018 |
Potential pathogenicity determinants identified from structural proteomics of SARS-CoV and SARS-CoV-2 ET Prates, MR Garvin, M Pavicic, P Jones, M Shah, O Demerdash, ... Molecular biology and evolution 38 (2), 702-715, 2021 | 25 | 2021 |
Multi-phenotype association decomposition: unraveling complex gene-phenotype relationships D Weighill, P Jones, C Bleker, P Ranjan, M Shah, N Zhao, M Martin, ... Frontiers in Genetics 10, 417, 2019 | 24 | 2019 |
Polypharmacy-associated risk of hospitalisation among people ageing with and without HIV: an observational study AC Justice, KS Gordon, J Romero, EJ Edelman, BJ Garcia, P Jones, ... The Lancet Healthy Longevity 2 (10), e639-e650, 2021 | 23 | 2021 |
Image-Based Methods to Score Fungal Pathogen Symptom Progression and Severity in Excised Arabidopsis Leaves M Pavicic, K Overmyer, AU Rehman, P Jones, D Jacobson, K Himanen Plants 10 (1), 158, 2021 | 21 | 2021 |
Epigenetic effects of paternal cocaine on reward stimulus behavior and accumbens gene expression in mice AM Yaw, RA Prosser, PC Jones, BJ Garcia, DA Jacobson, JD Glass Behavioural Brain Research 367, 68-81, 2019 | 17 | 2019 |
Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ... Frontiers in Plant Science 10, 1249, 2019 | 16 | 2019 |
Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data AM Walker, A Cliff, J Romero, MB Shah, P Jones, JGFM Gazolla, ... Computational and Structural Biotechnology Journal 20, 3372-3386, 2022 | 15 | 2022 |
Identification of novel, replicable genetic risk loci for suicidal thoughts and behaviors among US military veterans NA Kimbrel, AE Ashley-Koch, XJ Qin, JH Lindquist, ME Garrett, ... JAMA psychiatry 80 (2), 135-145, 2023 | 12 | 2023 |
A k-mer based approach for classifying viruses without taxonomy identifies viral associations in human autism and plant microbiomes BJ Garcia, R Simha, M Garvin, A Furches, P Jones, JGFM Gazolla, ... Computational and structural biotechnology journal 19, 5911-5919, 2021 | 11 | 2021 |