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Thorsten Falk (Schmidt)
Thorsten Falk (Schmidt)
Image Analysis Lab, University of Freiburg
informatik.uni-freiburg.de의 이메일 확인됨 - 홈페이지
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U-Net: deep learning for cell counting, detection, and morphometry
T Falk, D Mai, R Bensch, Ö Çiçek, A Abdulkadir, Y Marrakchi, A Böhm, ...
Nature Methods 16, 67-70, 2019
14532019
Single-cell profiling identifies myeloid cell subsets with distinct fates during neuroinflammation
MJC Jordão, R Sankowski, SM Brendecke, Sagar, G Locatelli, YH Tai, ...
Science 363 (6425), eaat7554, 2019
6002019
Rotation-invariant HOG descriptors using fourier analysis in polar and spherical coordinates
K Liu, H Skibbe, T Schmidt, T Blein, K Palme, T Brox, O Ronneberger
International Journal of Computer Vision 106 (3), 342-364, 2014
1662014
ViBE-Z: a framework for 3D virtual colocalization analysis in zebrafish larval brains
O Ronneberger, K Liu, M Rath, D Rueβ, T Mueller, H Skibbe, B Drayer, ...
Nature Methods 9 (7), 735-742, 2012
1582012
The iRoCS Toolbox–3D analysis of the plant root apical meristem at cellular resolution
T Schmidt, T Pasternak, K Liu, T Blein, D Aubry‐Hivet, A Dovzhenko, ...
The Plant Journal 77 (5), 806-814, 2014
812014
Inversin relays Frizzled-8 signals to promote proximal pronephros development
S Lienkamp, A Ganner, C Boehlke, T Schmidt, SJ Arnold, T Schäfer, ...
Proceedings of the National Academy of Sciences 107 (47), 20388-20393, 2010
642010
Flavonol‐mediated stabilization of PIN efflux complexes regulates polar auxin transport
WD Teale, T Pasternak, C Dal Bosco, A Dovzhenko, K Kratzat, W Bildl, ...
The EMBO Journal 40 (1), e104416, 2021
602021
U-Net: deep learning for cell counting, detection, and morphometry (vol 16, pg 67, 2019)
T Falk, D Mai, R Bensch, O Cicek, A Abdulkadir, Y Marrakchi, A Bohm, ...
Nature Methods 16 (4), 351-351, 2019
412019
Fast rotation invariant 3D feature computation utilizing efficient local neighborhood operators
H Skibbe, M Reisert, T Schmidt, T Brox, O Ronneberger, H Burkhardt
IEEE Transactions on Pattern Analysis and Machine Intelligence 34 (8), 1563-1575, 2011
402011
Hierarchical markov random fields for mast cell segmentation in electron microscopic recordings
M Keuper, T Schmidt, M Rodriguez-Franco, W Schamel, T Brox, ...
2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2011
252011
A 3D digital atlas of the Nicotiana tabacum root tip and its use to investigate changes in the root apical meristem induced by the Agrobacterium 6b oncogene
T Pasternak, T Haser, T Falk, O Ronneberger, K Palme, L Otten
The Plant Journal 92 (1), 31-42, 2017
222017
A 3D digital atlas of the Nicotiana tabacum root tip and its use to investigate changes in the root apical meristem induced by the Agrobacterium 6b oncogene
T Pasternak, T Haser, T Falk, O Ronneberger, K Palme, L Otten
The Plant Journal 92 (1), 31-42, 2017
222017
Blind deconvolution of widefield fluorescence microscopic data by regularization of the optical transfer function (OTF)
M Keuper, T Schmidt, M Temerinac-Ott, J Padeken, P Heun, ...
Proceedings of the IEEE Conference on Computer Vision and Pattern …, 2013
222013
Fast scalar and vectorial grayscale based invariant features for 3d cell nuclei localization and classification
J Schulz, T Schmidt, O Ronneberger, H Burkhardt, T Pasternak, ...
Joint Pattern Recognition Symposium, 182-191, 2006
212006
ISOODL: Instance segmentation of overlapping biological objects using deep learning
A Böhm, A Ücker, T Jäger, O Ronneberger, T Falk
2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018 …, 2018
162018
3D deformable surfaces with locally self-adjusting parameters-A robust method to determine cell nucleus shapes
M Keuper, T Schmidt, J Padeken, P Heun, K Palme, H Burkhardt, ...
2010 20th International Conference on Pattern Recognition, 2254-2257, 2010
102010
ISOO_DL^V2 - Semantic Instance Segmentation of Touching and Overlapping Objects
A Böhm, M Tatarchenko, T Falk
IEEE International Symposium on Biomedical Imaging (ISBI), 2019
92019
3D rotation-invariant description from tensor operation on spherical HOG field
K Liu, H Skibbe, T Schmidt, T Blein, K Palme, O Ronneberger
NeuroImage 57 (2), 416-422, 2011
92011
Modeling of sparsely sampled tubular surfaces using coupled curves
T Schmidt, M Keuper, T Pasternak, K Palme, O Ronneberger
Joint DAGM (German Association for Pattern Recognition) and OAGM Symposium …, 2012
82012
Light dynamically regulates growth rate and cellular organisation of the Arabidopsis root meristem.
T Blein, J Duerr, T Pasternak, T Haser, T Falk, K Liu, FA Ditengou, ...
bioRxiv, 353987, 2018
72018
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