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Utsab Shrestha
Utsab Shrestha
Senior Investigator at Roivant Discovery
roivant.com의 이메일 확인됨 - 홈페이지
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Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation
UR Shrestha, P Juneja, Q Zhang, V Gurumoorthy, JM Borreguero, ...
Proceedings of the National Academy of Sciences 116 (41), 20446-20452, 2019
402019
Effects of pressure on the dynamics of an oligomeric protein from deep-sea hyperthermophile
UR Shrestha, D Bhowmik, JRD Copley, M Tyagi, JB Leão, X Chu
Proceedings of the National Academy of Sciences 112 (45), 13886-13891, 2015
302015
Arabinose substitution effect on xylan rigidity and self-aggregation
UR Shrestha, S Smith, SV Pingali, H Yang, M Zahran, L Breunig, ...
Cellulose 26 (4), 2267-2278, 2019
212019
Quasi-elastic neutron scattering reveals ligand-induced protein dynamics of a G-protein-coupled receptor
UR Shrestha, SMDC Perera, D Bhowmik, U Chawla, E Mamontov, ...
The journal of physical chemistry letters 7 (20), 4130-4136, 2016
182016
Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations
UR Shrestha, JC Smith, L Petridis
Communications biology 4 (1), 1-8, 2021
152021
Effect of molecular shape on rotation under severe confinement
I Dhiman, D Bhowmik, UR Shrestha, DR Cole, S Gautam
Chemical Engineering Science 180, 33-41, 2018
152018
Using small-angle scattering data and parametric machine learning to optimize force field parameters for intrinsically disordered proteins
O Demerdash, UR Shrestha, L Petridis, JC Smith, JC Mitchell, ...
Frontiers in molecular biosciences, 64, 2019
132019
Small-angle neutron scattering reveals energy landscape for rhodopsin photoactivation
SMDC Perera, U Chawla, UR Shrestha, D Bhowmik, AV Struts, S Qian, ...
The Journal of Physical Chemistry Letters 9 (24), 7064-7071, 2018
122018
Influence of molecular shape on self-diffusion under severe confinement: A molecular dynamics study
I Dhiman, UR Shrestha, D Bhowmik, DR Cole, S Gautam
Chemical Physics 516, 92-102, 2019
72019
Probing the Domain Motions of an Oligomeric Protein from Deep-Sea Hyperthermophile by Neutron Spin Echo
D Bhowmik, G Kaur Dhindsa, AJ Rusek, KV Delinder, UR Shrestha, ...
Biophysical Journal 108 (2), 59a, 2015
52015
Collective excitations in protein as a measure of balance between its softness and rigidity
UR Shrestha, D Bhowmik, KW Van Delinder, E Mamontov, H O’Neill, ...
The Journal of Physical Chemistry B 121 (5), 923-930, 2017
42017
Small Angle Neutron and X-Ray Scattering Reveal Conformational Differences in Detergents Affecting Rhodopsin Activation
UR Shrestha, D Bhowmik, SMDC Perera, U Chawla, AV Struts, ...
Biophysical Journal 108 (2), 39a, 2015
42015
Rhodopsin Photoactivation Dynamics Revealed by Quasi-Elastic Neutron Scattering
D Bhowmik, UR Shrestha, SMDC Perera, U Chawla, E Mamontov, ...
Biophysical Journal 108 (2), 61a, 2015
32015
Atomic-Resolution Prediction of Degrader-mediated Ternary Complex Structures by Combining Molecular Simulations with Hydrogen Deuterium Exchange
T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ...
bioRxiv, 2021
22021
Neutron Scattering Reveals Protein Fluctuations in GPCR Activation
SMDC Perera, UR Shrestha, D Bhowmik, U Chawla, AV Struts, X Chu, ...
Biophysical Journal 110 (3), 228a-229a, 2016
22016
Effects of pressure on the dynamics of a hyperthermophilic protein revealed by quasielastic neutron scattering
UR Shrestha, D Bhowmik, JRD Copley, M Tyagi, JB Leao, XQ Chu
APS March Meeting Abstracts 2016, P41. 013, 2016
22016
Slow Domain Motions of an Oligomeric Protein from Deep-Sea Hyperthermophile probed by Neutron Spin Echo
D Bhowmik, U Shrestha, G Dhindsa, M Sharp, LR Stingaciu, XQ Chu, ...
APS March Meeting Abstracts 2016, M1. 258, 2016
22016
G-Protein-Coupled Receptor Activation Investigated using Small-Angle Neutron Scattering
SMDC Perera, UR Shrestha, U Chawla, AV Struts, S Qian, MF Brown, ...
Biophysical Journal 106 (2), 634a, 2014
22014
Mesophilic Pyrophosphatase Function at High Temperature: A Molecular Dynamics Simulation Study
R Agarwal, UR Shrestha, XQ Chu, L Petridis, JC Smith
Biophysical Journal 119 (1), 142-150, 2020
12020
Mesophilic enzyme function at high temperature: molecular dynamics of hyperthermophilic and mesophilic pyrophosphatases
R Agarwal, UR Shrestha, XQ Chu, L Petridis, JC Smith
bioRxiv, 2020
12020
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