| Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation UR Shrestha, P Juneja, Q Zhang, V Gurumoorthy, JM Borreguero, ... Proceedings of the National Academy of Sciences 116 (41), 20446-20452, 2019 | 82 | 2019 |
| Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations UR Shrestha, JC Smith, L Petridis Communications biology 4 (1), 243, 2021 | 60 | 2021 |
| Arabinose substitution effect on xylan rigidity and self-aggregation UR Shrestha, S Smith, SV Pingali, H Yang, M Zahran, L Breunig, ... Cellulose 26, 2267-2278, 2019 | 37 | 2019 |
| Effects of pressure on the dynamics of an oligomeric protein from deep-sea hyperthermophile UR Shrestha, D Bhowmik, JRD Copley, M Tyagi, JB Leão, X Chu Proceedings of the National Academy of Sciences 112 (45), 13886-13891, 2015 | 36 | 2015 |
| Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ... Nature communications 13 (1), 5884, 2022 | 28 | 2022 |
| Quasi-elastic neutron scattering reveals ligand-induced protein dynamics of a G-protein-coupled receptor UR Shrestha, SMDC Perera, D Bhowmik, U Chawla, E Mamontov, ... The journal of physical chemistry letters 7 (20), 4130-4136, 2016 | 25 | 2016 |
| Using small-angle scattering data and parametric machine learning to optimize force field parameters for intrinsically disordered proteins O Demerdash, UR Shrestha, L Petridis, JC Smith, JC Mitchell, ... Frontiers in molecular biosciences 6, 64, 2019 | 21 | 2019 |
| Small-angle neutron scattering reveals energy landscape for rhodopsin photoactivation SMDC Perera, U Chawla, UR Shrestha, D Bhowmik, AV Struts, S Qian, ... The Journal of Physical Chemistry Letters 9 (24), 7064-7071, 2018 | 20 | 2018 |
| Effect of molecular shape on rotation under severe confinement I Dhiman, D Bhowmik, UR Shrestha, DR Cole, S Gautam Chemical Engineering Science 180, 33-41, 2018 | 16 | 2018 |
| Atomic-resolution prediction of degrader-mediated ternary complex structures by combining molecular simulations with hydrogen deuterium exchange T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ... Biorxiv, 2021.09. 26.461830, 2021 | 12 | 2021 |
| Influence of molecular shape on self-diffusion under severe confinement: A molecular dynamics study I Dhiman, UR Shrestha, D Bhowmik, DR Cole, S Gautam Chemical Physics 516, 92-102, 2019 | 9 | 2019 |
| Collective excitations in protein as a measure of balance between its softness and rigidity UR Shrestha, D Bhowmik, KW Van Delinder, E Mamontov, H O’Neill, ... The Journal of Physical Chemistry B 121 (5), 923-930, 2017 | 6 | 2017 |
| Mesophilic Pyrophosphatase Function at High Temperature: A Molecular Dynamics Simulation Study R Agarwal, UR Shrestha, XQ Chu, L Petridis, JC Smith Biophysical Journal 119 (1), 142-150, 2020 | 5 | 2020 |
| Probing the Domain Motions of an Oligomeric Protein from Deep-Sea Hyperthermophile by Neutron Spin Echo D Bhowmik, G Kaur Dhindsa, AJ Rusek, KV Delinder, UR Shrestha, ... Biophysical Journal 108 (2), 59a, 2015 | 5 | 2015 |
| Small Angle Neutron and X-Ray Scattering Reveal Conformational Differences in Detergents Affecting Rhodopsin Activation UR Shrestha, D Bhowmik, SMDC Perera, U Chawla, AV Struts, ... Biophysical Journal 108 (2), 39a, 2015 | 4 | 2015 |
| Experimental mapping of short-wavelength phonons in proteins UR Shrestha, E Mamontov, HM O'Neill, Q Zhang, AI Kolesnikov, X Chu The Innovation 3 (1), 2022 | 3 | 2022 |
| Rhodopsin Photoactivation Dynamics Revealed by Quasi-Elastic Neutron Scattering D Bhowmik, UR Shrestha, SMDC Perera, U Chawla, E Mamontov, ... Biophysical Journal 108 (2), 61a, 2015 | 3 | 2015 |
| idpflex: Analysis of Intrinsically Disordered Proteins by Comparing Simulations to Small Angle Scattering Experiments JM Borreguero, FF Islam, UR Shrestha, L Petridis Journal of Open Source Software 3 (32), 2018 | 2 | 2018 |
| Neutron Scattering Reveals Protein Fluctuations in GPCR Activation SMDC Perera, UR Shrestha, D Bhowmik, U Chawla, AV Struts, X Chu, ... Biophysical Journal 110 (3), 228a-229a, 2016 | 2 | 2016 |
| Effects of pressure on the dynamics of a hyperthermophilic protein revealed by quasielastic neutron scattering UR Shrestha, D Bhowmik, JRD Copley, M Tyagi, JB Leao, XQ Chu APS March Meeting Abstracts 2016, P41. 013, 2016 | 2 | 2016 |
Xiang-qiang ChuDepartment of Physics, City University of Hong Kongcityu.edu.hk의 이메일 확인됨
