An integrative approach to predicting the functional effects of non-coding and coding sequence variation HA Shihab, MF Rogers, J Gough, M Mort, DN Cooper, INM Day, TR Gaunt, ... Bioinformatics 31 (10), 1536-1543, 2015 | 671 | 2015 |
FATHMM-XF: accurate prediction of pathogenic point mutations via extended features MF Rogers, HA Shihab, M Mort, DN Cooper, TR Gaunt, C Campbell Bioinformatics 34 (3), 511-513, 2018 | 342 | 2018 |
SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data MF Rogers, J Thomas, ASN Reddy, A Ben-Hur Genome biology 13, 1-17, 2012 | 165 | 2012 |
Treating the placenta to prevent adverse effects of gestational hypoxia on fetal brain development TJ Phillips, H Scott, DA Menassa, AL Bignell, A Sood, JS Morton, T Akagi, ... Scientific reports 7 (1), 9079, 2017 | 107 | 2017 |
Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements ASN Reddy, MF Rogers, DN Richardson, M Hamilton, A Ben-Hur Frontiers in plant science 3, 18, 2012 | 101 | 2012 |
Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii A Labadorf, A Link, MF Rogers, J Thomas, ASN Reddy, A Ben-Hur BMC genomics 11, 1-10, 2010 | 97 | 2010 |
Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing DN Richardson, MF Rogers, A Labadorf, A Ben-Hur, H Guo, AH Paterson, ... PloS one 6 (9), e24542, 2011 | 86 | 2011 |
CScape: a tool for predicting oncogenic single-point mutations in the cancer genome MF Rogers, HA Shihab, TR Gaunt, C Campbell Scientific reports 7 (1), 11597, 2017 | 67 | 2017 |
The use of gene ontology evidence codes in preventing classifier assessment bias MF Rogers, A Ben-Hur Bioinformatics 25 (9), 1173-1177, 2009 | 67 | 2009 |
ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data M Frenkel-Morgenstern, A Gorohovski, V Lacroix, M Rogers, K Ibanez, ... Nucleic acids research 41 (D1), D142-D151, 2012 | 63 | 2012 |
Glucocorticoid receptor–tethered mineralocorticoid receptors increase glucocorticoid-induced transcriptional responses CA Rivers, MF Rogers, FE Stubbs, BL Conway-Campbell, SL Lightman, ... Endocrinology 160 (5), 1044-1056, 2019 | 46 | 2019 |
Improving Illumina assemblies with Hi‐C and long reads: An example with the North African dromedary JP Elbers, MF Rogers, PL Perelman, AA Proskuryakova, NA Serdyukova, ... Molecular Ecology Resources 19 (4), 1015-1026, 2019 | 44 | 2019 |
HIPred: an integrative approach to predicting haploinsufficient genes HA Shihab, MF Rogers, C Campbell, TR Gaunt Bioinformatics 33 (12), 1751-1757, 2017 | 43 | 2017 |
An integrative approach to predicting the functional effects of small indels in non-coding regions of the human genome M Ferlaino, MF Rogers, HA Shihab, M Mort, DN Cooper, TR Gaunt, ... BMC bioinformatics 18, 1-8, 2017 | 42 | 2017 |
iCLIP identifies novel roles for SAFB1 in regulating RNA processing and neuronal function C Rivers, J Idris, H Scott, M Rogers, YB Lee, J Gaunt, L Phylactou, T Curk, ... BMC biology 13, 1-15, 2015 | 30 | 2015 |
RNA sequencing analysis of human podocytes reveals glucocorticoid regulated gene networks targeting non-immune pathways L Jiang, CCT Hindmarch, M Rogers, C Campbell, C Waterfall, J Coghill, ... Scientific reports 6 (1), 35671, 2016 | 27 | 2016 |
CScape-somatic: distinguishing driver and passenger point mutations in the cancer genome MF Rogers, TR Gaunt, C Campbell Bioinformatics 36 (12), 3637-3644, 2020 | 24 | 2020 |
Maternal antioxidant treatment prevents the adverse effects of prenatal stress on the offspring's brain and behavior H Scott, TJ Phillips, Y Sze, A Alfieri, MF Rogers, V Volpato, CP Case, ... Neurobiology of stress 13, 100281, 2020 | 22 | 2020 |
Preeclamptic placentae release factors that damage neurons: implications for foetal programming of disease H Scott, TJ Phillips, GC Stuart, MF Rogers, BR Steinkraus, S Grant, ... Neuronal Signaling 2 (4), NS20180139, 2018 | 21 | 2018 |
Sex‐specific differences in cardiovascular and metabolic hormones with integrated signalling in the paraventricular nucleus of the hypothalamus SP Loewen, AR Paterson, SY Loh, MF Rogers, CCT Hindmarch, ... Experimental physiology 102 (11), 1373-1379, 2017 | 21 | 2017 |