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Om Choudhary
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The Electrostatics of VDAC: Implications in Selectivity and Gating
OP Choudhary, R Ujwal, W Kowallis, R Coalson, J Abramson, M Grabe
Biophysical Journal 98 (3), 53a, 2010
1132010
Structure-guided simulations illuminate the mechanism of ATP transport through VDAC1
OP Choudhary, A Paz, JL Adelman, JP Colletier, J Abramson, M Grabe
Nature structural & molecular biology 21 (7), 626-632, 2014
1002014
APBSmem: a graphical interface for electrostatic calculations at the membrane
KM Callenberg, OP Choudhary, GL de Forest, DW Gohara, NA Baker, ...
PloS one 5 (9), e12722, 2010
982010
Development of a 13C NMR Chemical Shift Prediction Procedure Using B3LYP/cc-pVDZ and Empirically Derived Systematic Error Correction Terms: A …
D Xin, CA Sader, O Chaudhary, PJ Jones, K Wagner, CS Tautermann, ...
The journal of organic chemistry 82 (10), 5135-5145, 2017
692017
Modeling histological patterns for differential diagnosis of atypical breast lesions
A Parvatikar, O Choudhary, A Ramanathan, O Navolotskaia, G Carter, ...
Medical Image Computing and Computer Assisted Intervention–MICCAI 2020: 23rd …, 2020
22020
Characterizing ATP Permeation through the Voltage-Dependent Anion Channel VDAC
OP Choudhary, A Paz, J Adelman, JP Colletier, J Abramson, M Grabe
Biophysical Journal 106 (2), 147a-148a, 2014
22014
Prototypical models for classifying high-risk atypical breast lesions
A Parvatikar, O Choudhary, A Ramanathan, R Jenkins, O Navolotskaia, ...
Medical Image Computing and Computer Assisted Intervention–MICCAI 2021: 24th …, 2021
12021
Scalable and high precision context-guided segmentation of histological structures including ducts/glands and lumen, cluster of ducts/glands, and individual nuclei in whole …
SC Chennubhotla, O Choudhary, AB Tosun, J Fine
US Patent App. 17/909,891, 2023
2023
Revealing Intrinsic Motions of Biomacromolecular Machines with Distributed Elastic Network Models
OP Choudhary, C Lessuise, A Ramanathan, I Bahar, C Chennubhotla
Biophysical Journal, 2018
2018
Conformational Motions Impacting Function in an Enzyme Superfamily
C Narayanan, DN Bernard, K Bafna, OP Choudhary, CS Chennubhotla, ...
The FASEB Journal 31, 762.6-762.6, 2017
2017
Three‐dimensional structure of cyclic antibiotic teicoplanin aglycone using NMR distance and dihedral angle restraints in a DMSO solvation model
NC Gonnella, N Grinberg, M Mcloughlin, O Choudhary, K Fandrick, S Ma
Magnetic Resonance in Chemistry 53 (10), 829-835, 2015
2015
Probing the biophysical properties of the murine voltage dependent anion channel (mVDAC1) structure: Insight from continuum electrostatics and Markov state models
O Choudhary
University of Pittsburgh, 2014
2014
Characterizing ATP Permeation through mVDAC1 using Markov State Models (MSMs)
OP Choudhary, J Adelman, J Abramson, M Grabe
Biophysical Journal 102 (3), 550a, 2012
2012
APBSmem: A Tool for the Analysis of Membrane Protein Electrostatics
KM Callenberg, OP Choudhary, GL de Forest, DW Gohara, NA Baker, ...
Biophysical Journal 102 (3), 682a, 2012
2012
Conformational motions impacting function in the pancreatic-type ribonuclease superfamily
C Narayanan, DN Bernard, K Bafna, OP Choudhary, C Chennubhotla, ...
Correlating functional divergence and dynamical variations in the pancreatic-type ribonuclease superfamily
C Narayanan, DN Bernard, K Bafna, OP Choudhary, C Chennubhotla, ...
682a Webnesday, February 29, 2012
KM Callenberg, OP Choudhary, GL de Forest, DW Gohara, NA Baker, ...
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